Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2758
Experiment: MoYLS4 with Bacitracin 1.4 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Bacitracin 1.4 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,483,471 | + | tgt | DvMF_2757 | 0.43 | -3.4 |
3,483,471 | + | tgt | DvMF_2757 | 0.43 | -3.1 |
3,483,479 | - | tgt | DvMF_2757 | 0.44 | -4.1 |
3,483,585 | + | tgt | DvMF_2757 | 0.53 | -2.1 |
3,483,965 | + | tgt | DvMF_2757 | 0.86 | -4.5 |
3,484,071 | + | -2.0 | |||
3,485,245 | + | DvMF_2758 | 0.38 | -0.9 | |
3,485,457 | - | DvMF_2758 | 0.48 | +0.5 | |
3,485,632 | + | DvMF_2758 | 0.57 | -0.2 | |
3,485,693 | + | DvMF_2758 | 0.60 | -1.1 | |
3,485,933 | + | DvMF_2758 | 0.71 | -0.7 | |
3,486,097 | - | DvMF_2758 | 0.79 | -1.7 | |
3,486,193 | - | DvMF_2758 | 0.83 | -0.5 | |
3,486,202 | - | DvMF_2758 | 0.84 | -0.9 | |
3,486,389 | - | -0.4 | |||
3,486,485 | + | +0.9 | |||
3,486,567 | - | -1.3 | |||
3,486,992 | - | -2.2 | |||
3,487,043 | + | -0.4 | |||
3,487,086 | + | -0.4 | |||
3,487,086 | + | -0.5 | |||
3,487,098 | + | -0.4 | |||
3,487,176 | - | +0.7 | |||
3,487,370 | - | -0.9 | |||
3,487,390 | - | -1.3 | |||
3,487,468 | + | -0.2 |
Or see this region's nucleotide sequence