Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2756
Experiment: MoYLS4 with Bacitracin 1.4 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Bacitracin 1.4 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,480,697 | + | DvMF_2755 | 0.23 | -2.2 | |
3,481,046 | + | +0.7 | |||
3,481,054 | - | -0.8 | |||
3,481,121 | + | -0.4 | |||
3,481,121 | + | -0.9 | |||
3,481,164 | + | -0.9 | |||
3,481,172 | - | -1.0 | |||
3,481,172 | - | +3.8 | |||
3,481,402 | - | -1.5 | |||
3,481,586 | + | purT | DvMF_2756 | 0.12 | -1.5 |
3,481,644 | - | purT | DvMF_2756 | 0.17 | -0.2 |
3,481,890 | + | purT | DvMF_2756 | 0.38 | -1.1 |
3,481,893 | - | purT | DvMF_2756 | 0.38 | -1.3 |
3,481,914 | - | purT | DvMF_2756 | 0.40 | +0.0 |
3,481,930 | + | purT | DvMF_2756 | 0.41 | -0.3 |
3,481,930 | + | purT | DvMF_2756 | 0.41 | -1.0 |
3,481,968 | + | purT | DvMF_2756 | 0.45 | -0.6 |
3,482,242 | - | purT | DvMF_2756 | 0.68 | -0.7 |
3,482,703 | - | -0.9 | |||
3,482,831 | + | -0.1 | |||
3,482,839 | - | +0.1 | |||
3,482,883 | + | -0.9 | |||
3,482,924 | + | -1.8 | |||
3,483,092 | + | tgt | DvMF_2757 | 0.10 | -2.2 |
3,483,126 | + | tgt | DvMF_2757 | 0.13 | -2.8 |
3,483,378 | + | tgt | DvMF_2757 | 0.35 | -2.0 |
3,483,471 | + | tgt | DvMF_2757 | 0.43 | -3.4 |
3,483,471 | + | tgt | DvMF_2757 | 0.43 | -3.1 |
3,483,479 | - | tgt | DvMF_2757 | 0.44 | -4.1 |
3,483,585 | + | tgt | DvMF_2757 | 0.53 | -2.1 |
Or see this region's nucleotide sequence