Experiment: MoYLS4 with Bacitracin 1.4 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2727 and DvMF_2728 are separated by 45 nucleotides DvMF_2728 and DvMF_2729 are separated by 79 nucleotides DvMF_2729 and DvMF_2730 are separated by 91 nucleotides
DvMF_2727: DvMF_2727 - Recombinase (RefSeq), at 3,450,826 to 3,452,598
_2727
DvMF_2728: DvMF_2728 - magnesium chelatase ChlI subunit (RefSeq), at 3,452,644 to 3,453,618
_2728
DvMF_2729: DvMF_2729 - hypothetical protein (RefSeq), at 3,453,698 to 3,454,342
_2729
DvMF_2730: DvMF_2730 - hypothetical protein (RefSeq), at 3,454,434 to 3,454,952
_2730
Position (kb)
3452
3453
3454 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 3451.685 kb on + strand, within DvMF_2727 at 3451.806 kb on + strand, within DvMF_2727 at 3451.813 kb on + strand, within DvMF_2727 at 3452.003 kb on + strand, within DvMF_2727 at 3452.003 kb on + strand, within DvMF_2727 at 3452.003 kb on + strand, within DvMF_2727 at 3452.011 kb on - strand, within DvMF_2727 at 3452.328 kb on + strand, within DvMF_2727 at 3452.455 kb on + strand at 3452.469 kb on - strand at 3452.497 kb on - strand at 3452.518 kb on - strand at 3452.534 kb on - strand at 3452.600 kb on + strand at 3452.814 kb on + strand, within DvMF_2728 at 3452.814 kb on + strand, within DvMF_2728 at 3453.289 kb on - strand, within DvMF_2728 at 3453.388 kb on - strand, within DvMF_2728 at 3453.558 kb on - strand at 3453.588 kb on - strand at 3453.625 kb on + strand at 3453.633 kb on - strand at 3453.759 kb on - strand at 3453.807 kb on - strand, within DvMF_2729 at 3454.031 kb on + strand, within DvMF_2729 at 3454.044 kb on - strand, within DvMF_2729 at 3454.062 kb on + strand, within DvMF_2729 at 3454.062 kb on + strand, within DvMF_2729 at 3454.118 kb on + strand, within DvMF_2729 at 3454.126 kb on - strand, within DvMF_2729 at 3454.300 kb on + strand at 3454.319 kb on + strand at 3454.340 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Bacitracin 1.4 mg/ml remove 3,451,685 + DvMF_2727 0.48 -0.7 3,451,806 + DvMF_2727 0.55 -0.5 3,451,813 + DvMF_2727 0.56 -3.9 3,452,003 + DvMF_2727 0.66 -0.8 3,452,003 + DvMF_2727 0.66 -1.5 3,452,003 + DvMF_2727 0.66 -0.7 3,452,011 - DvMF_2727 0.67 -0.3 3,452,328 + DvMF_2727 0.85 -0.9 3,452,455 + -1.0 3,452,469 - -0.5 3,452,497 - -0.7 3,452,518 - +3.7 3,452,534 - -0.5 3,452,600 + -0.4 3,452,814 + DvMF_2728 0.17 -1.4 3,452,814 + DvMF_2728 0.17 -2.0 3,453,289 - DvMF_2728 0.66 -1.6 3,453,388 - DvMF_2728 0.76 -0.3 3,453,558 - -0.4 3,453,588 - +0.1 3,453,625 + -0.5 3,453,633 - +0.1 3,453,759 - -0.3 3,453,807 - DvMF_2729 0.17 -0.1 3,454,031 + DvMF_2729 0.52 -1.0 3,454,044 - DvMF_2729 0.54 -1.0 3,454,062 + DvMF_2729 0.56 -0.7 3,454,062 + DvMF_2729 0.56 -0.8 3,454,118 + DvMF_2729 0.65 -1.0 3,454,126 - DvMF_2729 0.66 +0.1 3,454,300 + +0.4 3,454,319 + -0.4 3,454,340 - -0.7
Or see this region's nucleotide sequence