Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2704

Experiment: MoYLS4 with Bacitracin 1.4 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDvMF_2703 and DvMF_2704 are separated by 5 nucleotidesDvMF_2704 and DvMF_2705 are separated by 13 nucleotides DvMF_2703: DvMF_2703 - hypothetical protein (RefSeq), at 3,419,978 to 3,422,101 _2703 DvMF_2704: DvMF_2704 - glycosyl transferase family 2 (RefSeq), at 3,422,107 to 3,422,943 _2704 DvMF_2705: DvMF_2705 - glycosyl transferase family 2 (RefSeq), at 3,422,957 to 3,423,961 _2705 Position (kb) 3422 3423Strain fitness (log2 ratio) -1 0 1 2 3at 3421.321 kb on + strand, within DvMF_2703at 3421.325 kb on + strand, within DvMF_2703at 3421.436 kb on + strand, within DvMF_2703at 3421.502 kb on + strand, within DvMF_2703at 3422.372 kb on - strand, within DvMF_2704

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Per-strain Table

Position Strand Gene LocusTag Fraction MoYLS4 with Bacitracin 1.4 mg/ml
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3,421,321 + DvMF_2703 0.63 +1.1
3,421,325 + DvMF_2703 0.63 +2.6
3,421,436 + DvMF_2703 0.69 +3.1
3,421,502 + DvMF_2703 0.72 +1.9
3,422,372 - DvMF_2704 0.32 +3.4

Or see this region's nucleotide sequence