Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2631

Experiment: MoYLS4 with Bacitracin 1.4 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDvMF_2630 and DvMF_2631 are separated by 11 nucleotidesDvMF_2631 and DvMF_2632 are separated by 1 nucleotides DvMF_2630: DvMF_2630 - penicillin-binding protein, 1A family (RefSeq), at 3,321,715 to 3,324,138 _2630 DvMF_2631: DvMF_2631 - hypothetical protein (RefSeq), at 3,324,150 to 3,324,980 _2631 DvMF_2632: DvMF_2632 - dolichyl-phosphate-mannose-protein mannosyltransferase family protein (RefSeq), at 3,324,982 to 3,326,772 _2632 Position (kb) 3324 3325Strain fitness (log2 ratio) -1 0 1at 3324.258 kb on - strand, within DvMF_2631at 3324.305 kb on + strand, within DvMF_2631at 3324.354 kb on - strand, within DvMF_2631at 3324.750 kb on + strand, within DvMF_2631at 3324.780 kb on + strand, within DvMF_2631at 3324.806 kb on + strand, within DvMF_2631at 3324.812 kb on + strand, within DvMF_2631at 3324.834 kb on + strand, within DvMF_2631

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Per-strain Table

Position Strand Gene LocusTag Fraction MoYLS4 with Bacitracin 1.4 mg/ml
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3,324,258 - DvMF_2631 0.13 -0.5
3,324,305 + DvMF_2631 0.19 +0.4
3,324,354 - DvMF_2631 0.25 -1.6
3,324,750 + DvMF_2631 0.72 +0.1
3,324,780 + DvMF_2631 0.76 -0.4
3,324,806 + DvMF_2631 0.79 +0.6
3,324,812 + DvMF_2631 0.80 -0.2
3,324,834 + DvMF_2631 0.82 +0.6

Or see this region's nucleotide sequence