Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2340
Experiment: MoYLS4 with Bacitracin 1.4 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Bacitracin 1.4 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,948,517 | - | DvMF_2339 | 0.62 | -0.8 | |
2,948,635 | - | DvMF_2339 | 0.66 | -0.5 | |
2,949,128 | - | DvMF_2339 | 0.85 | +0.3 | |
2,949,133 | - | DvMF_2339 | 0.85 | -1.1 | |
2,949,255 | + | -0.6 | |||
2,949,360 | + | -1.2 | |||
2,949,378 | + | -0.4 | |||
2,949,926 | + | DvMF_2340 | 0.15 | +1.6 | |
2,950,279 | - | DvMF_2340 | 0.27 | +2.3 | |
2,950,332 | + | DvMF_2340 | 0.29 | +2.3 | |
2,950,529 | + | DvMF_2340 | 0.36 | +2.0 | |
2,950,631 | - | DvMF_2340 | 0.40 | +1.7 | |
2,950,734 | - | DvMF_2340 | 0.43 | +1.0 | |
2,951,114 | + | DvMF_2340 | 0.57 | +1.5 | |
2,951,435 | + | DvMF_2340 | 0.68 | +1.5 | |
2,951,470 | + | DvMF_2340 | 0.69 | +1.4 | |
2,951,742 | - | DvMF_2340 | 0.79 | +1.1 | |
2,951,801 | + | DvMF_2340 | 0.81 | +2.5 | |
2,951,802 | + | DvMF_2340 | 0.81 | +0.5 | |
2,951,810 | - | DvMF_2340 | 0.82 | +1.0 | |
2,952,066 | + | +0.8 | |||
2,952,066 | + | +2.0 | |||
2,953,024 | + | DvMF_2341 | 0.43 | -1.5 | |
2,953,201 | + | -0.8 |
Or see this region's nucleotide sequence