Experiment: MoYLS4 with Bacitracin 1.4 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2310 and DvMF_2311 are separated by 364 nucleotides DvMF_2311 and DvMF_2312 overlap by 1 nucleotides
DvMF_2310: DvMF_2310 - hypothetical protein (RefSeq), at 2,903,639 to 2,904,985
_2310
DvMF_2311: DvMF_2311 - hypothetical protein (RefSeq), at 2,905,350 to 2,909,594
_2311
DvMF_2312: DvMF_2312 - metallophosphoesterase (RefSeq), at 2,909,594 to 2,911,135
_2312
Position (kb)
2905
2906
2907
2908
2909
2910 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 2904.432 kb on + strand, within DvMF_2310 at 2904.572 kb on + strand, within DvMF_2310 at 2905.134 kb on - strand at 2905.148 kb on - strand at 2905.426 kb on - strand at 2905.508 kb on - strand at 2905.646 kb on + strand at 2905.691 kb on - strand at 2906.097 kb on + strand, within DvMF_2311 at 2906.164 kb on - strand, within DvMF_2311 at 2906.364 kb on + strand, within DvMF_2311 at 2906.520 kb on - strand, within DvMF_2311 at 2906.568 kb on - strand, within DvMF_2311 at 2906.699 kb on + strand, within DvMF_2311 at 2907.531 kb on + strand, within DvMF_2311 at 2907.614 kb on + strand, within DvMF_2311 at 2907.671 kb on - strand, within DvMF_2311 at 2907.821 kb on - strand, within DvMF_2311 at 2907.933 kb on + strand, within DvMF_2311 at 2908.071 kb on + strand, within DvMF_2311 at 2908.148 kb on - strand, within DvMF_2311 at 2908.240 kb on + strand, within DvMF_2311 at 2908.240 kb on + strand, within DvMF_2311 at 2908.406 kb on - strand, within DvMF_2311 at 2908.409 kb on + strand, within DvMF_2311 at 2908.501 kb on + strand, within DvMF_2311 at 2908.518 kb on - strand, within DvMF_2311 at 2908.614 kb on + strand, within DvMF_2311 at 2908.684 kb on + strand, within DvMF_2311 at 2908.687 kb on - strand, within DvMF_2311 at 2908.869 kb on - strand, within DvMF_2311 at 2908.892 kb on - strand, within DvMF_2311 at 2909.033 kb on - strand, within DvMF_2311 at 2909.145 kb on + strand, within DvMF_2311 at 2909.245 kb on - strand at 2909.255 kb on - strand at 2909.275 kb on - strand at 2909.372 kb on + strand at 2909.616 kb on + strand at 2909.744 kb on + strand at 2909.909 kb on + strand, within DvMF_2312 at 2909.988 kb on + strand, within DvMF_2312 at 2910.197 kb on + strand, within DvMF_2312 at 2910.413 kb on + strand, within DvMF_2312 at 2910.500 kb on + strand, within DvMF_2312 at 2910.500 kb on + strand, within DvMF_2312 at 2910.508 kb on - strand, within DvMF_2312 at 2910.575 kb on + strand, within DvMF_2312
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Bacitracin 1.4 mg/ml remove 2,904,432 + DvMF_2310 0.59 -0.6 2,904,572 + DvMF_2310 0.69 -1.9 2,905,134 - -1.1 2,905,148 - -0.6 2,905,426 - -1.5 2,905,508 - -0.9 2,905,646 + -0.6 2,905,691 - -0.2 2,906,097 + DvMF_2311 0.18 -2.6 2,906,164 - DvMF_2311 0.19 -1.5 2,906,364 + DvMF_2311 0.24 -3.9 2,906,520 - DvMF_2311 0.28 -1.9 2,906,568 - DvMF_2311 0.29 -0.8 2,906,699 + DvMF_2311 0.32 -0.5 2,907,531 + DvMF_2311 0.51 -3.5 2,907,614 + DvMF_2311 0.53 -1.5 2,907,671 - DvMF_2311 0.55 -1.1 2,907,821 - DvMF_2311 0.58 -0.9 2,907,933 + DvMF_2311 0.61 -2.2 2,908,071 + DvMF_2311 0.64 -1.0 2,908,148 - DvMF_2311 0.66 -0.5 2,908,240 + DvMF_2311 0.68 -1.3 2,908,240 + DvMF_2311 0.68 -0.0 2,908,406 - DvMF_2311 0.72 -0.6 2,908,409 + DvMF_2311 0.72 -1.0 2,908,501 + DvMF_2311 0.74 -0.9 2,908,518 - DvMF_2311 0.75 -0.7 2,908,614 + DvMF_2311 0.77 -1.9 2,908,684 + DvMF_2311 0.79 -1.5 2,908,687 - DvMF_2311 0.79 -1.0 2,908,869 - DvMF_2311 0.83 -1.7 2,908,892 - DvMF_2311 0.83 -0.3 2,909,033 - DvMF_2311 0.87 -1.6 2,909,145 + DvMF_2311 0.89 -1.4 2,909,245 - -0.9 2,909,255 - -1.2 2,909,275 - -1.5 2,909,372 + -0.6 2,909,616 + -3.4 2,909,744 + -1.1 2,909,909 + DvMF_2312 0.20 -0.8 2,909,988 + DvMF_2312 0.26 -0.8 2,910,197 + DvMF_2312 0.39 -1.4 2,910,413 + DvMF_2312 0.53 -1.1 2,910,500 + DvMF_2312 0.59 -1.3 2,910,500 + DvMF_2312 0.59 -1.2 2,910,508 - DvMF_2312 0.59 -0.7 2,910,575 + DvMF_2312 0.64 -0.4
Or see this region's nucleotide sequence