Experiment: MoYLS4 with Bacitracin 1.4 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2285 and DvMF_2286 are separated by 19 nucleotides DvMF_2286 and DvMF_2287 are separated by 316 nucleotides DvMF_2287 and DvMF_2288 overlap by 32 nucleotides DvMF_2288 and DvMF_2289 overlap by 14 nucleotides
DvMF_2285: DvMF_2285 - flagellar basal-body rod protein FlgC (RefSeq), at 2,873,445 to 2,873,882
_2285
DvMF_2286: DvMF_2286 - flagellar hook-basal body complex subunit FliE (RefSeq), at 2,873,902 to 2,874,234
_2286
DvMF_2287: DvMF_2287 - flagellar M-ring protein FliF (RefSeq), at 2,874,551 to 2,876,170
_2287
DvMF_2288: DvMF_2288 - flagellar motor switch protein FliG (RefSeq), at 2,876,139 to 2,877,155
_2288
DvMF_2289: DvMF_2289 - flagellar assembly protein FliH, putative (RefSeq), at 2,877,142 to 2,877,906
_2289
Position (kb)
2874
2875
2876
2877 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 2873.566 kb on - strand, within DvMF_2285 at 2873.566 kb on - strand, within DvMF_2285 at 2873.817 kb on - strand, within DvMF_2285 at 2874.020 kb on - strand, within DvMF_2286 at 2874.219 kb on - strand at 2874.503 kb on + strand at 2874.506 kb on - strand at 2874.508 kb on + strand at 2874.583 kb on + strand at 2874.643 kb on - strand at 2874.837 kb on + strand, within DvMF_2287 at 2874.877 kb on - strand, within DvMF_2287 at 2874.909 kb on - strand, within DvMF_2287 at 2874.909 kb on - strand, within DvMF_2287 at 2875.111 kb on - strand, within DvMF_2287 at 2875.170 kb on + strand, within DvMF_2287 at 2875.194 kb on + strand, within DvMF_2287 at 2875.206 kb on - strand, within DvMF_2287 at 2875.295 kb on - strand, within DvMF_2287 at 2875.362 kb on + strand, within DvMF_2287 at 2875.438 kb on - strand, within DvMF_2287 at 2875.673 kb on + strand, within DvMF_2287 at 2875.729 kb on + strand, within DvMF_2287 at 2875.815 kb on + strand, within DvMF_2287 at 2875.843 kb on - strand, within DvMF_2287 at 2875.870 kb on + strand, within DvMF_2287 at 2875.914 kb on + strand, within DvMF_2287 at 2875.936 kb on - strand, within DvMF_2287 at 2876.047 kb on + strand at 2876.062 kb on + strand at 2876.124 kb on + strand at 2876.441 kb on - strand, within DvMF_2288 at 2876.586 kb on + strand, within DvMF_2288 at 2876.622 kb on - strand, within DvMF_2288 at 2876.914 kb on - strand, within DvMF_2288 at 2876.935 kb on + strand, within DvMF_2288 at 2876.956 kb on + strand, within DvMF_2288 at 2876.977 kb on - strand, within DvMF_2288
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Bacitracin 1.4 mg/ml remove 2,873,566 - DvMF_2285 0.28 +2.6 2,873,566 - DvMF_2285 0.28 +2.7 2,873,817 - DvMF_2285 0.85 +4.4 2,874,020 - DvMF_2286 0.35 +3.4 2,874,219 - +3.4 2,874,503 + -0.7 2,874,506 - -0.8 2,874,508 + -1.4 2,874,583 + +2.4 2,874,643 - +1.1 2,874,837 + DvMF_2287 0.18 +0.8 2,874,877 - DvMF_2287 0.20 +2.1 2,874,909 - DvMF_2287 0.22 +2.3 2,874,909 - DvMF_2287 0.22 +1.2 2,875,111 - DvMF_2287 0.35 +1.1 2,875,170 + DvMF_2287 0.38 +1.1 2,875,194 + DvMF_2287 0.40 +1.4 2,875,206 - DvMF_2287 0.40 +2.5 2,875,295 - DvMF_2287 0.46 +3.5 2,875,362 + DvMF_2287 0.50 +1.3 2,875,438 - DvMF_2287 0.55 +1.0 2,875,673 + DvMF_2287 0.69 -2.6 2,875,729 + DvMF_2287 0.73 +1.2 2,875,815 + DvMF_2287 0.78 +1.2 2,875,843 - DvMF_2287 0.80 +1.1 2,875,870 + DvMF_2287 0.81 +1.7 2,875,914 + DvMF_2287 0.84 +2.1 2,875,936 - DvMF_2287 0.85 +0.7 2,876,047 + +1.1 2,876,062 + +1.3 2,876,124 + +0.3 2,876,441 - DvMF_2288 0.30 +0.9 2,876,586 + DvMF_2288 0.44 +1.7 2,876,622 - DvMF_2288 0.47 +0.9 2,876,914 - DvMF_2288 0.76 +1.0 2,876,935 + DvMF_2288 0.78 +1.3 2,876,956 + DvMF_2288 0.80 +1.2 2,876,977 - DvMF_2288 0.82 +1.1
Or see this region's nucleotide sequence