Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2266
Experiment: MoYLS4 with Bacitracin 1.4 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Bacitracin 1.4 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,845,952 | + | DvMF_2265 | 0.29 | -1.3 | |
2,845,952 | + | DvMF_2265 | 0.29 | -1.6 | |
2,845,971 | - | DvMF_2265 | 0.31 | -1.6 | |
2,847,030 | + | DvMF_2266 | 0.17 | +0.5 | |
2,847,042 | + | DvMF_2266 | 0.18 | +0.2 | |
2,847,103 | - | DvMF_2266 | 0.22 | +0.4 | |
2,847,283 | - | DvMF_2266 | 0.33 | +0.5 | |
2,847,601 | + | DvMF_2266 | 0.54 | +0.1 | |
2,847,609 | - | DvMF_2266 | 0.54 | +0.5 | |
2,847,688 | - | DvMF_2266 | 0.60 | +0.2 | |
2,847,777 | + | DvMF_2266 | 0.65 | +0.3 | |
2,847,839 | + | DvMF_2266 | 0.69 | +0.2 | |
2,847,839 | + | DvMF_2266 | 0.69 | -0.1 | |
2,847,850 | + | DvMF_2266 | 0.70 | +1.3 | |
2,847,850 | + | DvMF_2266 | 0.70 | +0.4 | |
2,847,858 | - | DvMF_2266 | 0.71 | +0.7 | |
2,848,164 | - | +0.4 | |||
2,848,243 | + | +1.2 | |||
2,848,277 | + | +0.6 | |||
2,848,297 | + | +0.5 | |||
2,848,381 | + | +0.3 | |||
2,848,471 | - | DvMF_2267 | 0.16 | -0.2 | |
2,848,603 | + | DvMF_2267 | 0.28 | +0.0 | |
2,848,675 | + | DvMF_2267 | 0.35 | -0.4 | |
2,848,683 | - | DvMF_2267 | 0.36 | +0.1 | |
2,848,694 | + | DvMF_2267 | 0.37 | -0.7 | |
2,848,711 | - | DvMF_2267 | 0.39 | -0.0 | |
2,848,711 | - | DvMF_2267 | 0.39 | -0.7 | |
2,848,785 | + | DvMF_2267 | 0.46 | +0.3 | |
2,848,785 | + | DvMF_2267 | 0.46 | +0.9 | |
2,849,223 | - | DvMF_2267 | 0.88 | +0.3 |
Or see this region's nucleotide sequence