Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2263
Experiment: MoYLS4 with Bacitracin 1.4 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Bacitracin 1.4 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,841,512 | + | DvMF_2262 | 0.20 | +0.6 | |
2,841,613 | + | DvMF_2262 | 0.31 | +0.4 | |
2,841,621 | - | DvMF_2262 | 0.32 | -3.0 | |
2,841,699 | - | DvMF_2262 | 0.41 | -0.1 | |
2,841,754 | + | DvMF_2262 | 0.47 | -0.8 | |
2,841,754 | + | DvMF_2262 | 0.47 | -1.1 | |
2,841,754 | + | DvMF_2262 | 0.47 | +0.3 | |
2,841,754 | + | DvMF_2262 | 0.47 | +0.2 | |
2,841,762 | - | DvMF_2262 | 0.48 | -1.0 | |
2,841,762 | - | DvMF_2262 | 0.48 | -0.3 | |
2,841,813 | + | DvMF_2262 | 0.54 | +0.1 | |
2,841,939 | - | DvMF_2262 | 0.68 | +0.4 | |
2,842,002 | - | DvMF_2262 | 0.76 | -0.3 | |
2,842,369 | - | -0.8 | |||
2,842,429 | + | -0.6 | |||
2,842,484 | + | -1.6 | |||
2,844,086 | - | -0.5 | |||
2,844,091 | - | -1.0 | |||
2,844,118 | - | -0.6 | |||
2,844,122 | + | -0.5 | |||
2,844,692 | - | DvMF_2264 | 0.13 | -0.1 | |
2,844,828 | - | DvMF_2264 | 0.26 | -1.0 | |
2,844,840 | + | DvMF_2264 | 0.28 | -1.2 | |
2,844,918 | - | DvMF_2264 | 0.35 | -0.6 | |
2,844,943 | - | DvMF_2264 | 0.38 | -0.6 | |
2,844,944 | - | DvMF_2264 | 0.38 | +3.0 |
Or see this region's nucleotide sequence