Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2098
Experiment: MoYLS4 with Bacitracin 1.4 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Bacitracin 1.4 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,613,541 | - | -0.3 | |||
2,613,543 | + | -0.8 | |||
2,613,718 | - | DvMF_2097 | 0.32 | -0.6 | |
2,614,104 | - | DvMF_2097 | 0.87 | -0.6 | |
2,614,199 | - | -1.1 | |||
2,614,206 | + | -0.1 | |||
2,614,232 | - | -1.9 | |||
2,614,241 | - | -1.8 | |||
2,614,328 | - | -1.3 | |||
2,614,534 | - | -0.6 | |||
2,614,712 | + | DvMF_2098 | 0.17 | -0.2 | |
2,614,795 | + | DvMF_2098 | 0.23 | -0.6 | |
2,614,803 | - | DvMF_2098 | 0.23 | -0.7 | |
2,614,803 | - | DvMF_2098 | 0.23 | +0.4 | |
2,615,104 | + | DvMF_2098 | 0.45 | -1.2 | |
2,615,137 | - | DvMF_2098 | 0.47 | -0.0 | |
2,615,199 | + | DvMF_2098 | 0.51 | -0.7 | |
2,615,505 | + | DvMF_2098 | 0.73 | -0.3 | |
2,615,540 | - | DvMF_2098 | 0.76 | -0.5 | |
2,615,570 | + | DvMF_2098 | 0.78 | -0.7 | |
2,615,674 | + | DvMF_2098 | 0.85 | +0.1 | |
2,615,682 | - | DvMF_2098 | 0.86 | -0.4 | |
2,615,738 | - | DvMF_2098 | 0.90 | -0.7 | |
2,615,805 | + | -0.8 | |||
2,616,247 | - | DvMF_2099 | 0.18 | -2.2 | |
2,616,252 | - | DvMF_2099 | 0.18 | -2.3 | |
2,616,252 | - | DvMF_2099 | 0.18 | -1.5 | |
2,616,432 | - | DvMF_2099 | 0.31 | -1.4 | |
2,616,666 | + | DvMF_2099 | 0.49 | -1.7 | |
2,616,715 | + | DvMF_2099 | 0.53 | -2.2 | |
2,616,723 | - | DvMF_2099 | 0.53 | -3.0 | |
2,616,735 | + | DvMF_2099 | 0.54 | -1.0 |
Or see this region's nucleotide sequence