Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1844

Experiment: MoYLS4 with Bacitracin 1.4 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDvMF_1843 and DvMF_1844 are separated by 177 nucleotidesDvMF_1844 and DvMF_1845 overlap by 16 nucleotides DvMF_1843: DvMF_1843 - acetyltransferase (RefSeq), at 2,255,115 to 2,255,783 _1843 DvMF_1844: DvMF_1844 - acylneuraminate cytidylyltransferase (RefSeq), at 2,255,961 to 2,256,725 _1844 DvMF_1845: DvMF_1845 - N-acylneuraminate-9-phosphate synthase (RefSeq), at 2,256,710 to 2,257,744 _1845 Position (kb) 2255 2256 2257Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 2255.091 kb on + strandat 2255.121 kb on + strandat 2255.126 kb on - strandat 2255.184 kb on + strand, within DvMF_1843at 2255.497 kb on + strand, within DvMF_1843at 2255.546 kb on - strand, within DvMF_1843at 2255.631 kb on + strand, within DvMF_1843at 2255.703 kb on - strand, within DvMF_1843at 2256.017 kb on - strandat 2256.125 kb on + strand, within DvMF_1844at 2256.130 kb on + strand, within DvMF_1844at 2256.142 kb on + strand, within DvMF_1844at 2256.822 kb on - strand, within DvMF_1845at 2256.953 kb on + strand, within DvMF_1845at 2256.998 kb on + strand, within DvMF_1845at 2257.050 kb on + strand, within DvMF_1845at 2257.068 kb on - strand, within DvMF_1845at 2257.190 kb on + strand, within DvMF_1845at 2257.229 kb on + strand, within DvMF_1845at 2257.463 kb on - strand, within DvMF_1845at 2257.510 kb on - strand, within DvMF_1845at 2257.510 kb on - strand, within DvMF_1845at 2257.556 kb on + strand, within DvMF_1845at 2257.598 kb on - strand, within DvMF_1845at 2257.601 kb on + strand, within DvMF_1845at 2257.601 kb on + strand, within DvMF_1845at 2257.609 kb on - strand, within DvMF_1845

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Per-strain Table

Position Strand Gene LocusTag Fraction MoYLS4 with Bacitracin 1.4 mg/ml
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2,255,091 + -0.8
2,255,121 + -1.2
2,255,126 - -2.4
2,255,184 + DvMF_1843 0.10 -0.7
2,255,497 + DvMF_1843 0.57 -0.2
2,255,546 - DvMF_1843 0.64 -0.7
2,255,631 + DvMF_1843 0.77 -0.6
2,255,703 - DvMF_1843 0.88 -0.9
2,256,017 - +0.7
2,256,125 + DvMF_1844 0.21 +3.6
2,256,130 + DvMF_1844 0.22 -0.8
2,256,142 + DvMF_1844 0.24 -0.7
2,256,822 - DvMF_1845 0.11 -1.2
2,256,953 + DvMF_1845 0.23 -0.5
2,256,998 + DvMF_1845 0.28 -3.5
2,257,050 + DvMF_1845 0.33 +0.1
2,257,068 - DvMF_1845 0.35 -0.6
2,257,190 + DvMF_1845 0.46 -0.4
2,257,229 + DvMF_1845 0.50 -0.6
2,257,463 - DvMF_1845 0.73 -1.5
2,257,510 - DvMF_1845 0.77 -1.0
2,257,510 - DvMF_1845 0.77 -1.3
2,257,556 + DvMF_1845 0.82 -0.3
2,257,598 - DvMF_1845 0.86 -1.9
2,257,601 + DvMF_1845 0.86 -0.2
2,257,601 + DvMF_1845 0.86 -1.4
2,257,609 - DvMF_1845 0.87 -2.0

Or see this region's nucleotide sequence