Experiment: MoYLS4 with Bacitracin 1.4 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1581 and DvMF_1582 overlap by 4 nucleotides DvMF_1582 and DvMF_1583 overlap by 4 nucleotides DvMF_1583 and DvMF_1584 overlap by 8 nucleotides DvMF_1584 and DvMF_1585 are separated by 39 nucleotides
DvMF_1581: DvMF_1581 - inner-membrane translocator (RefSeq), at 1,950,400 to 1,951,326
_1581
DvMF_1582: DvMF_1582 - inner-membrane translocator (RefSeq), at 1,951,323 to 1,952,264
_1582
DvMF_1583: DvMF_1583 - ABC transporter related (RefSeq), at 1,952,261 to 1,952,983
_1583
DvMF_1584: DvMF_1584 - ABC transporter related (RefSeq), at 1,952,976 to 1,953,680
_1584
DvMF_1585: DvMF_1585 - CBS domain containing protein (RefSeq), at 1,953,720 to 1,954,373
_1585
Position (kb)
1952
1953 Strain fitness (log2 ratio)
-1
0
1 at 1951.346 kb on + strand at 1951.527 kb on + strand, within DvMF_1582 at 1951.618 kb on + strand, within DvMF_1582 at 1951.654 kb on + strand, within DvMF_1582 at 1951.819 kb on - strand, within DvMF_1582 at 1951.847 kb on - strand, within DvMF_1582 at 1951.941 kb on - strand, within DvMF_1582 at 1951.969 kb on - strand, within DvMF_1582 at 1952.352 kb on - strand, within DvMF_1583 at 1952.393 kb on - strand, within DvMF_1583 at 1952.393 kb on - strand, within DvMF_1583 at 1952.398 kb on - strand, within DvMF_1583 at 1952.403 kb on - strand, within DvMF_1583 at 1952.443 kb on + strand, within DvMF_1583 at 1952.443 kb on + strand, within DvMF_1583 at 1952.516 kb on - strand, within DvMF_1583 at 1952.516 kb on - strand, within DvMF_1583 at 1952.610 kb on - strand, within DvMF_1583 at 1952.618 kb on + strand, within DvMF_1583 at 1952.803 kb on - strand, within DvMF_1583 at 1952.919 kb on - strand at 1952.952 kb on + strand at 1953.141 kb on + strand, within DvMF_1584 at 1953.150 kb on - strand, within DvMF_1584 at 1953.190 kb on + strand, within DvMF_1584 at 1953.263 kb on - strand, within DvMF_1584 at 1953.324 kb on - strand, within DvMF_1584 at 1953.351 kb on + strand, within DvMF_1584 at 1953.532 kb on - strand, within DvMF_1584 at 1953.649 kb on - strand at 1953.723 kb on - strand at 1953.757 kb on - strand at 1953.935 kb on + strand, within DvMF_1585
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Bacitracin 1.4 mg/ml remove 1,951,346 + +0.1 1,951,527 + DvMF_1582 0.22 -1.2 1,951,618 + DvMF_1582 0.31 -1.1 1,951,654 + DvMF_1582 0.35 -0.5 1,951,819 - DvMF_1582 0.53 -0.2 1,951,847 - DvMF_1582 0.56 -0.7 1,951,941 - DvMF_1582 0.66 -1.6 1,951,969 - DvMF_1582 0.69 +0.2 1,952,352 - DvMF_1583 0.13 -1.0 1,952,393 - DvMF_1583 0.18 -0.1 1,952,393 - DvMF_1583 0.18 -1.3 1,952,398 - DvMF_1583 0.19 -1.6 1,952,403 - DvMF_1583 0.20 -1.4 1,952,443 + DvMF_1583 0.25 -1.4 1,952,443 + DvMF_1583 0.25 -0.6 1,952,516 - DvMF_1583 0.35 -1.5 1,952,516 - DvMF_1583 0.35 -0.4 1,952,610 - DvMF_1583 0.48 -0.3 1,952,618 + DvMF_1583 0.49 -0.8 1,952,803 - DvMF_1583 0.75 +1.4 1,952,919 - -1.3 1,952,952 + -0.7 1,953,141 + DvMF_1584 0.23 +0.1 1,953,150 - DvMF_1584 0.25 -0.6 1,953,190 + DvMF_1584 0.30 -0.8 1,953,263 - DvMF_1584 0.41 -0.5 1,953,324 - DvMF_1584 0.49 +0.4 1,953,351 + DvMF_1584 0.53 +0.1 1,953,532 - DvMF_1584 0.79 -0.7 1,953,649 - -0.2 1,953,723 - -0.5 1,953,757 - -1.4 1,953,935 + DvMF_1585 0.33 -0.6
Or see this region's nucleotide sequence