Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1510
Experiment: MoYLS4 with Bacitracin 1.4 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Bacitracin 1.4 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,860,744 | - | -1.1 | |||
1,860,755 | + | -0.6 | |||
1,860,755 | + | +0.1 | |||
1,860,763 | - | -0.2 | |||
1,860,764 | - | -0.3 | |||
1,860,822 | + | -0.9 | |||
1,860,962 | + | DvMF_1509 | 0.31 | -0.8 | |
1,861,099 | - | DvMF_1509 | 0.63 | -0.5 | |
1,861,593 | - | +0.3 | |||
1,861,643 | - | -0.4 | |||
1,861,735 | - | +0.2 | |||
1,861,935 | - | DvMF_1510 | 0.21 | -0.0 | |
1,862,142 | - | DvMF_1510 | 0.35 | +0.2 | |
1,862,223 | + | DvMF_1510 | 0.41 | -0.5 | |
1,862,238 | - | DvMF_1510 | 0.42 | -0.5 | |
1,862,259 | + | DvMF_1510 | 0.44 | -0.4 | |
1,862,286 | - | DvMF_1510 | 0.45 | -0.3 | |
1,862,305 | - | DvMF_1510 | 0.47 | -0.2 | |
1,862,437 | + | DvMF_1510 | 0.56 | -1.0 | |
1,862,460 | - | DvMF_1510 | 0.58 | +0.1 | |
1,862,491 | - | DvMF_1510 | 0.60 | -0.5 | |
1,862,540 | + | DvMF_1510 | 0.63 | -0.2 | |
1,862,610 | - | DvMF_1510 | 0.68 | -0.3 | |
1,862,686 | - | DvMF_1510 | 0.74 | +0.1 | |
1,862,938 | + | +0.7 | |||
1,863,481 | + | DvMF_1511 | 0.29 | -0.7 | |
1,863,631 | - | DvMF_1511 | 0.49 | -0.7 | |
1,863,678 | + | DvMF_1511 | 0.56 | +0.1 | |
1,863,686 | - | DvMF_1511 | 0.57 | -1.1 | |
1,863,817 | + | DvMF_1511 | 0.74 | +1.2 | |
1,863,825 | - | DvMF_1511 | 0.75 | -0.1 |
Or see this region's nucleotide sequence