Experiment: MoYLS4 with Bacitracin 1.4 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1342 and DvMF_1343 overlap by 4 nucleotides DvMF_1343 and DvMF_1344 are separated by 465 nucleotides
DvMF_1342: DvMF_1342 - ABC transporter related (RefSeq), at 1,637,224 to 1,637,955
_1342
DvMF_1343: DvMF_1343 - polar amino acid ABC transporter, inner membrane subunit (RefSeq), at 1,637,952 to 1,638,965
_1343
DvMF_1344: DvMF_1344 - extracellular solute-binding protein family 3 (RefSeq), at 1,639,431 to 1,640,249
_1344
Position (kb)
1637
1638
1639 Strain fitness (log2 ratio)
-2
-1
0
1 at 1637.114 kb on + strand at 1637.273 kb on + strand at 1637.281 kb on - strand at 1637.343 kb on - strand, within DvMF_1342 at 1637.350 kb on + strand, within DvMF_1342 at 1637.477 kb on + strand, within DvMF_1342 at 1637.793 kb on + strand, within DvMF_1342 at 1637.883 kb on + strand at 1637.883 kb on + strand at 1637.984 kb on - strand at 1638.013 kb on + strand at 1638.015 kb on + strand at 1638.015 kb on + strand at 1638.015 kb on + strand at 1638.023 kb on - strand at 1638.023 kb on - strand at 1638.023 kb on - strand at 1638.023 kb on - strand at 1638.028 kb on - strand at 1638.042 kb on - strand at 1638.082 kb on + strand, within DvMF_1343 at 1638.181 kb on - strand, within DvMF_1343 at 1638.241 kb on + strand, within DvMF_1343 at 1638.387 kb on - strand, within DvMF_1343 at 1638.387 kb on - strand, within DvMF_1343 at 1638.421 kb on - strand, within DvMF_1343 at 1638.469 kb on + strand, within DvMF_1343 at 1638.479 kb on + strand, within DvMF_1343 at 1638.550 kb on + strand, within DvMF_1343 at 1638.942 kb on + strand at 1638.945 kb on - strand at 1638.949 kb on + strand at 1638.949 kb on + strand at 1638.949 kb on + strand at 1639.550 kb on - strand, within DvMF_1344 at 1639.584 kb on + strand, within DvMF_1344 at 1639.609 kb on + strand, within DvMF_1344 at 1639.879 kb on + strand, within DvMF_1344
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Bacitracin 1.4 mg/ml remove 1,637,114 + -0.5 1,637,273 + -0.7 1,637,281 - -0.7 1,637,343 - DvMF_1342 0.16 -0.3 1,637,350 + DvMF_1342 0.17 -0.5 1,637,477 + DvMF_1342 0.35 -0.4 1,637,793 + DvMF_1342 0.78 -1.7 1,637,883 + -0.3 1,637,883 + -1.2 1,637,984 - -0.6 1,638,013 + -1.5 1,638,015 + -0.9 1,638,015 + -0.3 1,638,015 + +1.6 1,638,023 - -1.3 1,638,023 - -0.3 1,638,023 - -0.8 1,638,023 - -0.7 1,638,028 - -0.3 1,638,042 - -0.0 1,638,082 + DvMF_1343 0.13 -1.3 1,638,181 - DvMF_1343 0.23 +0.3 1,638,241 + DvMF_1343 0.29 -1.1 1,638,387 - DvMF_1343 0.43 -2.0 1,638,387 - DvMF_1343 0.43 -2.1 1,638,421 - DvMF_1343 0.46 -1.8 1,638,469 + DvMF_1343 0.51 -1.1 1,638,479 + DvMF_1343 0.52 +0.1 1,638,550 + DvMF_1343 0.59 -0.8 1,638,942 + -0.4 1,638,945 - -0.9 1,638,949 + -0.8 1,638,949 + -0.9 1,638,949 + -0.7 1,639,550 - DvMF_1344 0.15 -1.6 1,639,584 + DvMF_1344 0.19 -1.0 1,639,609 + DvMF_1344 0.22 -1.8 1,639,879 + DvMF_1344 0.55 -0.5
Or see this region's nucleotide sequence