Experiment: MoYLS4 with Bacitracin 1.4 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1288 and DvMF_1289 are separated by 204 nucleotides DvMF_1289 and DvMF_1290 are separated by 142 nucleotides DvMF_1290 and DvMF_1291 overlap by 4 nucleotides
DvMF_1288: DvMF_1288 - hypothetical protein (RefSeq), at 1,578,990 to 1,579,994
_1288
DvMF_1289: DvMF_1289 - protein of unknown function DUF1320 (RefSeq), at 1,580,199 to 1,580,630
_1289
DvMF_1290: DvMF_1290 - phage virion morphogenesis protein (RefSeq), at 1,580,773 to 1,581,219
_1290
DvMF_1291: DvMF_1291 - hypothetical protein (RefSeq), at 1,581,216 to 1,581,752
_1291
Position (kb)
1580
1581 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1579.284 kb on - strand, within DvMF_1288 at 1579.383 kb on + strand, within DvMF_1288 at 1579.386 kb on + strand, within DvMF_1288 at 1579.470 kb on - strand, within DvMF_1288 at 1579.684 kb on + strand, within DvMF_1288 at 1579.692 kb on - strand, within DvMF_1288 at 1579.702 kb on - strand, within DvMF_1288 at 1579.734 kb on + strand, within DvMF_1288 at 1579.739 kb on + strand, within DvMF_1288 at 1579.778 kb on + strand, within DvMF_1288 at 1579.827 kb on + strand, within DvMF_1288 at 1579.827 kb on + strand, within DvMF_1288 at 1579.827 kb on + strand, within DvMF_1288 at 1579.832 kb on + strand, within DvMF_1288 at 1579.932 kb on - strand at 1579.934 kb on + strand at 1579.942 kb on - strand at 1580.156 kb on + strand at 1580.232 kb on - strand at 1580.306 kb on + strand, within DvMF_1289 at 1580.323 kb on - strand, within DvMF_1289 at 1580.651 kb on - strand at 1580.791 kb on + strand at 1580.806 kb on + strand at 1580.840 kb on + strand, within DvMF_1290 at 1581.097 kb on + strand, within DvMF_1290 at 1581.153 kb on + strand, within DvMF_1290 at 1581.153 kb on + strand, within DvMF_1290 at 1581.161 kb on - strand, within DvMF_1290 at 1581.186 kb on + strand at 1581.396 kb on + strand, within DvMF_1291 at 1581.593 kb on + strand, within DvMF_1291 at 1581.598 kb on + strand, within DvMF_1291
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Bacitracin 1.4 mg/ml remove 1,579,284 - DvMF_1288 0.29 -1.7 1,579,383 + DvMF_1288 0.39 -1.2 1,579,386 + DvMF_1288 0.39 -2.2 1,579,470 - DvMF_1288 0.48 -2.7 1,579,684 + DvMF_1288 0.69 +1.3 1,579,692 - DvMF_1288 0.70 -0.7 1,579,702 - DvMF_1288 0.71 -1.3 1,579,734 + DvMF_1288 0.74 -0.2 1,579,739 + DvMF_1288 0.75 +0.3 1,579,778 + DvMF_1288 0.78 -0.3 1,579,827 + DvMF_1288 0.83 -0.8 1,579,827 + DvMF_1288 0.83 -0.7 1,579,827 + DvMF_1288 0.83 -0.6 1,579,832 + DvMF_1288 0.84 -0.7 1,579,932 - -0.7 1,579,934 + +0.1 1,579,942 - -0.4 1,580,156 + -0.6 1,580,232 - -0.8 1,580,306 + DvMF_1289 0.25 -0.8 1,580,323 - DvMF_1289 0.29 -2.1 1,580,651 - +0.6 1,580,791 + -2.0 1,580,806 + -1.0 1,580,840 + DvMF_1290 0.15 -0.3 1,581,097 + DvMF_1290 0.72 +1.0 1,581,153 + DvMF_1290 0.85 -0.8 1,581,153 + DvMF_1290 0.85 -1.9 1,581,161 - DvMF_1290 0.87 -1.6 1,581,186 + -1.2 1,581,396 + DvMF_1291 0.34 +0.4 1,581,593 + DvMF_1291 0.70 +1.8 1,581,598 + DvMF_1291 0.71 +0.1
Or see this region's nucleotide sequence