Experiment: MoYLS4 with Bacitracin 1.4 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1170 and DvMF_1171 are separated by 30 nucleotides DvMF_1171 and DvMF_1172 are separated by 124 nucleotides DvMF_1172 and DvMF_1173 are separated by 148 nucleotides
DvMF_1170: DvMF_1170 - Alcohol dehydrogenase zinc-binding domain protein (RefSeq), at 1,447,299 to 1,448,294
_1170
DvMF_1171: DvMF_1171 - C_GCAxxG_C_C family protein (RefSeq), at 1,448,325 to 1,449,098
_1171
DvMF_1172: DvMF_1172 - Rhodanese domain protein (RefSeq), at 1,449,223 to 1,449,744
_1172
DvMF_1173: DvMF_1173 - hypothetical protein (RefSeq), at 1,449,893 to 1,450,369
_1173
Position (kb)
1448
1449
1450 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1447.519 kb on - strand, within DvMF_1170 at 1447.741 kb on + strand at 1447.961 kb on - strand, within DvMF_1170 at 1448.042 kb on + strand, within DvMF_1170 at 1448.105 kb on + strand, within DvMF_1170 at 1448.389 kb on - strand at 1448.919 kb on - strand, within DvMF_1171 at 1448.971 kb on - strand, within DvMF_1171 at 1449.000 kb on + strand, within DvMF_1171 at 1449.244 kb on + strand at 1449.244 kb on + strand at 1449.252 kb on - strand at 1449.252 kb on - strand at 1449.299 kb on - strand, within DvMF_1172 at 1449.346 kb on - strand, within DvMF_1172 at 1449.649 kb on - strand, within DvMF_1172 at 1449.687 kb on + strand, within DvMF_1172 at 1449.695 kb on - strand at 1449.952 kb on + strand, within DvMF_1173 at 1449.960 kb on - strand, within DvMF_1173 at 1450.004 kb on + strand, within DvMF_1173
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Bacitracin 1.4 mg/ml remove 1,447,519 - DvMF_1170 0.22 -0.0 1,447,741 + +2.4 1,447,961 - DvMF_1170 0.66 -1.1 1,448,042 + DvMF_1170 0.75 -0.3 1,448,105 + DvMF_1170 0.81 -1.9 1,448,389 - -0.7 1,448,919 - DvMF_1171 0.77 -0.1 1,448,971 - DvMF_1171 0.83 -0.8 1,449,000 + DvMF_1171 0.87 -0.2 1,449,244 + -0.5 1,449,244 + +0.6 1,449,252 - -1.0 1,449,252 - -0.3 1,449,299 - DvMF_1172 0.15 +0.8 1,449,346 - DvMF_1172 0.24 -0.6 1,449,649 - DvMF_1172 0.82 -1.1 1,449,687 + DvMF_1172 0.89 +0.1 1,449,695 - -0.6 1,449,952 + DvMF_1173 0.12 -0.3 1,449,960 - DvMF_1173 0.14 +0.1 1,450,004 + DvMF_1173 0.23 -0.9
Or see this region's nucleotide sequence