Experiment: MoYLS4 with Bacitracin 1.4 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1162 and DvMF_1163 overlap by 1 nucleotides DvMF_1163 and DvMF_1164 are separated by 12 nucleotides DvMF_1164 and DvMF_1165 are separated by 30 nucleotides
DvMF_1162: DvMF_1162 - ABC transporter related (RefSeq), at 1,437,322 to 1,438,047
_1162
DvMF_1163: DvMF_1163 - ABC transporter related (RefSeq), at 1,438,047 to 1,438,814
_1163
DvMF_1164: DvMF_1164 - inner-membrane translocator (RefSeq), at 1,438,827 to 1,439,903
_1164
DvMF_1165: DvMF_1165 - inner-membrane translocator (RefSeq), at 1,439,934 to 1,440,854
_1165
Position (kb)
1438
1439
1440 Strain fitness (log2 ratio)
-1
0
1
2
3
4 at 1437.910 kb on + strand, within DvMF_1162 at 1438.303 kb on - strand, within DvMF_1163 at 1438.338 kb on - strand, within DvMF_1163 at 1438.542 kb on - strand, within DvMF_1163 at 1439.010 kb on - strand, within DvMF_1164 at 1439.014 kb on - strand, within DvMF_1164 at 1439.171 kb on - strand, within DvMF_1164 at 1439.183 kb on - strand, within DvMF_1164 at 1439.231 kb on - strand, within DvMF_1164 at 1439.254 kb on + strand, within DvMF_1164 at 1439.341 kb on + strand, within DvMF_1164 at 1439.672 kb on - strand, within DvMF_1164 at 1439.672 kb on - strand, within DvMF_1164 at 1439.799 kb on + strand at 1439.799 kb on + strand at 1439.807 kb on - strand at 1440.178 kb on + strand, within DvMF_1165 at 1440.186 kb on - strand, within DvMF_1165 at 1440.421 kb on + strand, within DvMF_1165 at 1440.429 kb on - strand, within DvMF_1165 at 1440.525 kb on + strand, within DvMF_1165 at 1440.528 kb on - strand, within DvMF_1165 at 1440.555 kb on - strand, within DvMF_1165 at 1440.656 kb on + strand, within DvMF_1165 at 1440.771 kb on - strand at 1440.774 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Bacitracin 1.4 mg/ml remove 1,437,910 + DvMF_1162 0.81 +0.3 1,438,303 - DvMF_1163 0.33 +1.0 1,438,338 - DvMF_1163 0.38 -1.5 1,438,542 - DvMF_1163 0.64 -1.5 1,439,010 - DvMF_1164 0.17 -0.8 1,439,014 - DvMF_1164 0.17 +3.5 1,439,171 - DvMF_1164 0.32 -0.6 1,439,183 - DvMF_1164 0.33 -0.6 1,439,231 - DvMF_1164 0.38 +3.8 1,439,254 + DvMF_1164 0.40 -0.6 1,439,341 + DvMF_1164 0.48 -1.7 1,439,672 - DvMF_1164 0.78 -0.8 1,439,672 - DvMF_1164 0.78 +1.8 1,439,799 + +0.5 1,439,799 + -0.6 1,439,807 - -1.2 1,440,178 + DvMF_1165 0.26 -0.5 1,440,186 - DvMF_1165 0.27 +3.3 1,440,421 + DvMF_1165 0.53 -0.8 1,440,429 - DvMF_1165 0.54 -0.8 1,440,525 + DvMF_1165 0.64 -0.5 1,440,528 - DvMF_1165 0.64 +0.4 1,440,555 - DvMF_1165 0.67 -0.6 1,440,656 + DvMF_1165 0.78 +0.0 1,440,771 - -0.6 1,440,774 - -0.7
Or see this region's nucleotide sequence