Experiment: MoYLS4 with Bacitracin 1.4 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1144 and DvMF_1145 overlap by 4 nucleotides DvMF_1145 and DvMF_1146 are separated by 532 nucleotides DvMF_1146 and DvMF_1147 are separated by 966 nucleotides
DvMF_1144: DvMF_1144 - hypothetical protein (RefSeq), at 1,403,824 to 1,404,039
_1144
DvMF_1145: DvMF_1145 - hypothetical protein (RefSeq), at 1,404,036 to 1,404,221
_1145
DvMF_1146: DvMF_1146 - hypothetical protein (RefSeq), at 1,404,754 to 1,405,446
_1146
DvMF_1147: DvMF_1147 - L-lactate permease family protein, putative (RefSeq), at 1,406,413 to 1,407,966
_1147
Position (kb)
1404
1405
1406 Strain fitness (log2 ratio)
-2
-1
0
1 at 1403.783 kb on + strand at 1403.815 kb on - strand at 1403.829 kb on - strand at 1403.835 kb on - strand at 1403.948 kb on + strand, within DvMF_1144 at 1403.948 kb on + strand, within DvMF_1144 at 1403.976 kb on + strand, within DvMF_1144 at 1404.095 kb on + strand, within DvMF_1145 at 1404.555 kb on + strand at 1404.563 kb on - strand at 1404.676 kb on + strand at 1404.803 kb on - strand at 1404.854 kb on + strand, within DvMF_1146 at 1405.166 kb on + strand, within DvMF_1146 at 1405.263 kb on - strand, within DvMF_1146 at 1405.374 kb on - strand, within DvMF_1146 at 1405.407 kb on + strand at 1405.414 kb on + strand at 1405.414 kb on + strand at 1405.414 kb on + strand at 1405.422 kb on - strand at 1405.422 kb on - strand at 1405.748 kb on + strand at 1405.820 kb on + strand at 1405.875 kb on + strand at 1405.933 kb on + strand at 1405.941 kb on - strand at 1406.094 kb on - strand at 1406.414 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Bacitracin 1.4 mg/ml remove 1,403,783 + -1.7 1,403,815 - -0.7 1,403,829 - -0.7 1,403,835 - -0.6 1,403,948 + DvMF_1144 0.57 -1.1 1,403,948 + DvMF_1144 0.57 -1.6 1,403,976 + DvMF_1144 0.70 -0.9 1,404,095 + DvMF_1145 0.32 -1.0 1,404,555 + -1.8 1,404,563 - -0.3 1,404,676 + -0.3 1,404,803 - -0.9 1,404,854 + DvMF_1146 0.14 -0.4 1,405,166 + DvMF_1146 0.59 -0.3 1,405,263 - DvMF_1146 0.73 -0.8 1,405,374 - DvMF_1146 0.89 -1.6 1,405,407 + -1.0 1,405,414 + -1.4 1,405,414 + +0.1 1,405,414 + -0.5 1,405,422 - -1.4 1,405,422 - -0.1 1,405,748 + -0.5 1,405,820 + -1.6 1,405,875 + -0.5 1,405,933 + -1.6 1,405,941 - -2.7 1,406,094 - -0.0 1,406,414 + +0.1
Or see this region's nucleotide sequence