Experiment: MoYLS4 with Bacitracin 1.4 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1136 and DvMF_1137 are separated by 226 nucleotides DvMF_1137 and DvMF_1138 are separated by 5 nucleotides DvMF_1138 and DvMF_1139 overlap by 1 nucleotides DvMF_1139 and DvMF_1140 are separated by 164 nucleotides
DvMF_1136: DvMF_1136 - Tetratricopeptide domain protein (RefSeq), at 1,394,477 to 1,395,385
_1136
DvMF_1137: DvMF_1137 - orotidine 5'-phosphate decarboxylase (RefSeq), at 1,395,612 to 1,396,364
_1137
DvMF_1138: DvMF_1138 - Guanylate kinase (RefSeq), at 1,396,370 to 1,396,999
_1138
DvMF_1139: DvMF_1139 - hypothetical protein (RefSeq), at 1,396,999 to 1,397,265
_1139
DvMF_1140: DvMF_1140 - hypothetical protein (RefSeq), at 1,397,430 to 1,398,311
_1140
Position (kb)
1396
1397 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 1395.552 kb on + strand at 1395.689 kb on - strand, within DvMF_1137 at 1395.777 kb on + strand, within DvMF_1137 at 1395.846 kb on + strand, within DvMF_1137 at 1396.012 kb on - strand, within DvMF_1137 at 1396.012 kb on - strand, within DvMF_1137 at 1396.216 kb on - strand, within DvMF_1137 at 1397.177 kb on + strand, within DvMF_1139 at 1397.654 kb on + strand, within DvMF_1140 at 1397.836 kb on + strand, within DvMF_1140
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Bacitracin 1.4 mg/ml remove 1,395,552 + -0.4 1,395,689 - DvMF_1137 0.10 -4.0 1,395,777 + DvMF_1137 0.22 -2.4 1,395,846 + DvMF_1137 0.31 -2.9 1,396,012 - DvMF_1137 0.53 -2.7 1,396,012 - DvMF_1137 0.53 -2.0 1,396,216 - DvMF_1137 0.80 -2.4 1,397,177 + DvMF_1139 0.67 -1.3 1,397,654 + DvMF_1140 0.25 +0.5 1,397,836 + DvMF_1140 0.46 -0.3
Or see this region's nucleotide sequence