Experiment: MoYLS4 with Bacitracin 1.4 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1051 and DvMF_1052 are separated by 327 nucleotides DvMF_1052 and DvMF_1053 are separated by 281 nucleotides
DvMF_1051: DvMF_1051 - TPR repeat-containing protein (RefSeq), at 1,283,869 to 1,284,516
_1051
DvMF_1052: DvMF_1052 - multi-sensor hybrid histidine kinase (RefSeq), at 1,284,844 to 1,289,943
_1052
DvMF_1053: DvMF_1053 - transcriptional regulator, TetR family (RefSeq), at 1,290,225 to 1,290,806
_1053
Position (kb)
1284
1285
1286
1287
1288
1289
1290 Strain fitness (log2 ratio)
-7
-6
-5
-4
-3
-2
-1
0
1 at 1284.126 kb on + strand, within DvMF_1051 at 1284.322 kb on - strand, within DvMF_1051 at 1284.533 kb on + strand at 1284.533 kb on + strand at 1284.533 kb on + strand at 1284.541 kb on - strand at 1284.541 kb on - strand at 1285.185 kb on + strand at 1285.221 kb on + strand at 1285.229 kb on - strand at 1285.284 kb on - strand at 1285.406 kb on + strand, within DvMF_1052 at 1285.423 kb on - strand, within DvMF_1052 at 1285.434 kb on + strand, within DvMF_1052 at 1285.466 kb on + strand, within DvMF_1052 at 1285.509 kb on + strand, within DvMF_1052 at 1285.608 kb on - strand, within DvMF_1052 at 1285.663 kb on + strand, within DvMF_1052 at 1285.723 kb on + strand, within DvMF_1052 at 1285.742 kb on + strand, within DvMF_1052 at 1285.748 kb on + strand, within DvMF_1052 at 1285.762 kb on - strand, within DvMF_1052 at 1285.819 kb on + strand, within DvMF_1052 at 1285.980 kb on - strand, within DvMF_1052 at 1286.026 kb on + strand, within DvMF_1052 at 1286.185 kb on - strand, within DvMF_1052 at 1286.258 kb on - strand, within DvMF_1052 at 1286.401 kb on + strand, within DvMF_1052 at 1286.818 kb on + strand, within DvMF_1052 at 1286.958 kb on - strand, within DvMF_1052 at 1286.973 kb on + strand, within DvMF_1052 at 1287.691 kb on - strand, within DvMF_1052 at 1287.834 kb on - strand, within DvMF_1052 at 1287.852 kb on - strand, within DvMF_1052 at 1288.164 kb on - strand, within DvMF_1052 at 1288.404 kb on - strand, within DvMF_1052 at 1288.531 kb on + strand, within DvMF_1052 at 1288.580 kb on + strand, within DvMF_1052 at 1288.746 kb on + strand, within DvMF_1052 at 1288.917 kb on - strand, within DvMF_1052 at 1289.025 kb on - strand, within DvMF_1052 at 1289.132 kb on + strand, within DvMF_1052 at 1289.181 kb on - strand, within DvMF_1052 at 1289.777 kb on + strand at 1289.809 kb on - strand at 1290.060 kb on + strand at 1290.113 kb on - strand at 1290.684 kb on + strand, within DvMF_1053
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Bacitracin 1.4 mg/ml remove 1,284,126 + DvMF_1051 0.40 -0.6 1,284,322 - DvMF_1051 0.70 -0.8 1,284,533 + +0.0 1,284,533 + -1.9 1,284,533 + -0.5 1,284,541 - -0.3 1,284,541 - -0.2 1,285,185 + -3.2 1,285,221 + -3.9 1,285,229 - -4.7 1,285,284 - -3.2 1,285,406 + DvMF_1052 0.11 -7.2 1,285,423 - DvMF_1052 0.11 -4.8 1,285,434 + DvMF_1052 0.12 -4.8 1,285,466 + DvMF_1052 0.12 -3.7 1,285,509 + DvMF_1052 0.13 -4.9 1,285,608 - DvMF_1052 0.15 -3.8 1,285,663 + DvMF_1052 0.16 -4.7 1,285,723 + DvMF_1052 0.17 -5.0 1,285,742 + DvMF_1052 0.18 -4.4 1,285,748 + DvMF_1052 0.18 -6.2 1,285,762 - DvMF_1052 0.18 -2.9 1,285,819 + DvMF_1052 0.19 -6.6 1,285,980 - DvMF_1052 0.22 -4.8 1,286,026 + DvMF_1052 0.23 -3.5 1,286,185 - DvMF_1052 0.26 -4.7 1,286,258 - DvMF_1052 0.28 -4.1 1,286,401 + DvMF_1052 0.31 -3.8 1,286,818 + DvMF_1052 0.39 -4.7 1,286,958 - DvMF_1052 0.41 -2.7 1,286,973 + DvMF_1052 0.42 -5.4 1,287,691 - DvMF_1052 0.56 -2.6 1,287,834 - DvMF_1052 0.59 -3.1 1,287,852 - DvMF_1052 0.59 -4.1 1,288,164 - DvMF_1052 0.65 -5.3 1,288,404 - DvMF_1052 0.70 -4.6 1,288,531 + DvMF_1052 0.72 -5.8 1,288,580 + DvMF_1052 0.73 -5.1 1,288,746 + DvMF_1052 0.77 -5.5 1,288,917 - DvMF_1052 0.80 -5.5 1,289,025 - DvMF_1052 0.82 -5.0 1,289,132 + DvMF_1052 0.84 -3.7 1,289,181 - DvMF_1052 0.85 -4.1 1,289,777 + -4.6 1,289,809 - -3.1 1,290,060 + +0.7 1,290,113 - -0.4 1,290,684 + DvMF_1053 0.79 -0.4
Or see this region's nucleotide sequence