Experiment: MoYLS4 with Bacitracin 1.4 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0920 and DvMF_0921 overlap by 4 nucleotides DvMF_0921 and DvMF_0922 are separated by 3 nucleotides
DvMF_0920: DvMF_0920 - binding-protein-dependent transport systems inner membrane component (RefSeq), at 1,112,010 to 1,113,041
_0920
DvMF_0921: DvMF_0921 - binding-protein-dependent transport systems inner membrane component (RefSeq), at 1,113,038 to 1,113,892
_0921
DvMF_0922: DvMF_0922 - hypothetical protein (RefSeq), at 1,113,896 to 1,115,659
_0922
Position (kb)
1113
1114 Strain fitness (log2 ratio)
-7
-6
-5
-4
-3
-2
-1
0
1 at 1112.189 kb on - strand, within DvMF_0920 at 1112.203 kb on - strand, within DvMF_0920 at 1112.417 kb on + strand, within DvMF_0920 at 1112.477 kb on - strand, within DvMF_0920 at 1112.601 kb on + strand, within DvMF_0920 at 1112.687 kb on - strand, within DvMF_0920 at 1112.699 kb on + strand, within DvMF_0920 at 1112.699 kb on + strand, within DvMF_0920 at 1112.707 kb on - strand, within DvMF_0920 at 1112.891 kb on + strand, within DvMF_0920 at 1113.063 kb on - strand at 1113.105 kb on + strand at 1113.406 kb on + strand, within DvMF_0921 at 1113.540 kb on + strand, within DvMF_0921 at 1113.695 kb on + strand, within DvMF_0921 at 1113.703 kb on - strand, within DvMF_0921 at 1113.728 kb on + strand, within DvMF_0921 at 1114.103 kb on - strand, within DvMF_0922 at 1114.203 kb on - strand, within DvMF_0922 at 1114.203 kb on - strand, within DvMF_0922 at 1114.285 kb on - strand, within DvMF_0922 at 1114.515 kb on + strand, within DvMF_0922 at 1114.592 kb on - strand, within DvMF_0922 at 1114.623 kb on + strand, within DvMF_0922 at 1114.706 kb on + strand, within DvMF_0922 at 1114.791 kb on - strand, within DvMF_0922
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Bacitracin 1.4 mg/ml remove 1,112,189 - DvMF_0920 0.17 -6.8 1,112,203 - DvMF_0920 0.19 -5.2 1,112,417 + DvMF_0920 0.39 -4.8 1,112,477 - DvMF_0920 0.45 -1.3 1,112,601 + DvMF_0920 0.57 -4.2 1,112,687 - DvMF_0920 0.66 -4.0 1,112,699 + DvMF_0920 0.67 -5.8 1,112,699 + DvMF_0920 0.67 -3.8 1,112,707 - DvMF_0920 0.68 -5.0 1,112,891 + DvMF_0920 0.85 -6.2 1,113,063 - -5.1 1,113,105 + -6.3 1,113,406 + DvMF_0921 0.43 -3.9 1,113,540 + DvMF_0921 0.59 -4.6 1,113,695 + DvMF_0921 0.77 -4.8 1,113,703 - DvMF_0921 0.78 -2.6 1,113,728 + DvMF_0921 0.81 -5.0 1,114,103 - DvMF_0922 0.12 +0.2 1,114,203 - DvMF_0922 0.17 -0.8 1,114,203 - DvMF_0922 0.17 -1.7 1,114,285 - DvMF_0922 0.22 -0.8 1,114,515 + DvMF_0922 0.35 -0.8 1,114,592 - DvMF_0922 0.39 -1.0 1,114,623 + DvMF_0922 0.41 -1.1 1,114,706 + DvMF_0922 0.46 -0.1 1,114,791 - DvMF_0922 0.51 -1.6
Or see this region's nucleotide sequence