Experiment: MoYLS4 with Bacitracin 1.4 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0858 and DvMF_0859 overlap by 4 nucleotides DvMF_0859 and DvMF_0860 are separated by 190 nucleotides DvMF_0860 and DvMF_0861 are separated by 89 nucleotides DvMF_0861 and DvMF_0862 overlap by 14 nucleotides
DvMF_0858: DvMF_0858 - hypothetical protein (RefSeq), at 1,035,310 to 1,035,669
_0858
DvMF_0859: DvMF_0859 - protein of unknown function DUF340 membrane (RefSeq), at 1,035,666 to 1,036,271
_0859
DvMF_0860: DvMF_0860 - extracellular solute-binding protein family 3 (RefSeq), at 1,036,462 to 1,037,202
_0860
DvMF_0861: DvMF_0861 - polar amino acid ABC transporter, inner membrane subunit (RefSeq), at 1,037,292 to 1,038,083
_0861
DvMF_0862: DvMF_0862 - ABC transporter related (RefSeq), at 1,038,070 to 1,038,816
_0862
Position (kb)
1036
1037
1038 Strain fitness (log2 ratio)
-2
-1
0
1 at 1036.023 kb on - strand, within DvMF_0859 at 1036.430 kb on + strand at 1036.451 kb on - strand at 1036.766 kb on + strand, within DvMF_0860 at 1036.784 kb on + strand, within DvMF_0860 at 1037.124 kb on - strand, within DvMF_0860 at 1037.236 kb on - strand at 1037.302 kb on - strand at 1037.434 kb on + strand, within DvMF_0861 at 1037.434 kb on + strand, within DvMF_0861 at 1037.476 kb on + strand, within DvMF_0861 at 1037.644 kb on - strand, within DvMF_0861 at 1037.709 kb on - strand, within DvMF_0861 at 1037.805 kb on - strand, within DvMF_0861 at 1037.819 kb on + strand, within DvMF_0861 at 1037.907 kb on - strand, within DvMF_0861 at 1038.023 kb on + strand at 1038.031 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Bacitracin 1.4 mg/ml remove 1,036,023 - DvMF_0859 0.59 -1.0 1,036,430 + -1.3 1,036,451 - -1.2 1,036,766 + DvMF_0860 0.41 -2.0 1,036,784 + DvMF_0860 0.43 -1.3 1,037,124 - DvMF_0860 0.89 -1.5 1,037,236 - -1.9 1,037,302 - -1.0 1,037,434 + DvMF_0861 0.18 -1.9 1,037,434 + DvMF_0861 0.18 -1.0 1,037,476 + DvMF_0861 0.23 -0.6 1,037,644 - DvMF_0861 0.44 -1.3 1,037,709 - DvMF_0861 0.53 -1.4 1,037,805 - DvMF_0861 0.65 -0.9 1,037,819 + DvMF_0861 0.67 -1.0 1,037,907 - DvMF_0861 0.78 -1.0 1,038,023 + -0.6 1,038,031 - -1.0
Or see this region's nucleotide sequence