Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_0769

Experiment: MoYLS4 with Bacitracin 1.4 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDvMF_0768 and DvMF_0769 are separated by 136 nucleotidesDvMF_0769 and DvMF_0770 overlap by 4 nucleotidesDvMF_0770 and DvMF_0771 are separated by 55 nucleotides DvMF_0768: DvMF_0768 - response regulator receiver modulated diguanylate cyclase (RefSeq), at 921,576 to 922,637 _0768 DvMF_0769: DvMF_0769 - metal dependent phosphohydrolase (RefSeq), at 922,774 to 923,613 _0769 DvMF_0770: DvMF_0770 - hypothetical protein (RefSeq), at 923,610 to 924,104 _0770 DvMF_0771: DvMF_0771 - DNA protecting protein DprA (RefSeq), at 924,160 to 925,821 _0771 Position (kb) 922 923 924Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 922.034 kb on - strand, within DvMF_0768at 922.291 kb on - strand, within DvMF_0768at 922.394 kb on - strand, within DvMF_0768at 922.572 kb on + strandat 923.258 kb on + strand, within DvMF_0769at 923.519 kb on - strand, within DvMF_0769at 923.845 kb on - strand, within DvMF_0770at 923.974 kb on + strand, within DvMF_0770at 924.197 kb on + strandat 924.237 kb on + strandat 924.307 kb on + strandat 924.342 kb on + strand, within DvMF_0771

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Per-strain Table

Position Strand Gene LocusTag Fraction MoYLS4 with Bacitracin 1.4 mg/ml
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922,034 - DvMF_0768 0.43 -0.6
922,291 - DvMF_0768 0.67 -1.6
922,394 - DvMF_0768 0.77 -1.6
922,572 + -3.0
923,258 + DvMF_0769 0.58 +2.7
923,519 - DvMF_0769 0.89 -0.3
923,845 - DvMF_0770 0.47 +0.3
923,974 + DvMF_0770 0.74 -2.2
924,197 + -0.4
924,237 + -0.3
924,307 + -0.6
924,342 + DvMF_0771 0.11 -0.2

Or see this region's nucleotide sequence