Experiment: MoYLS4 with Bacitracin 1.4 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0650 and DvMF_0651 are separated by 487 nucleotides DvMF_0651 and DvMF_0652 are separated by 154 nucleotides
DvMF_0650: DvMF_0650 - putative transcriptional regulator, ModE family (RefSeq), at 782,404 to 782,814
_0650
DvMF_0651: DvMF_0651 - hypothetical protein (RefSeq), at 783,302 to 784,576
_0651
DvMF_0652: DvMF_0652 - Agmatine deiminase (RefSeq), at 784,731 to 785,843
_0652
Position (kb) 783
784
785 Strain fitness (log2 ratio) -2
-1
0
1
2 at 782.303 kb on - strand at 782.336 kb on - strand at 782.336 kb on - strand at 782.397 kb on - strand at 782.505 kb on + strand, within DvMF_0650 at 782.579 kb on - strand, within DvMF_0650 at 782.621 kb on + strand, within DvMF_0650 at 782.645 kb on - strand, within DvMF_0650 at 783.088 kb on - strand at 783.349 kb on - strand at 783.383 kb on - strand at 783.390 kb on - strand at 783.524 kb on + strand, within DvMF_0651 at 783.599 kb on - strand, within DvMF_0651 at 783.731 kb on - strand, within DvMF_0651 at 783.951 kb on - strand, within DvMF_0651 at 783.956 kb on - strand, within DvMF_0651 at 784.324 kb on - strand, within DvMF_0651 at 784.369 kb on + strand, within DvMF_0651 at 784.375 kb on + strand, within DvMF_0651 at 784.383 kb on - strand, within DvMF_0651 at 784.472 kb on - strand at 784.893 kb on - strand, within DvMF_0652 at 785.198 kb on - strand, within DvMF_0652 at 785.371 kb on + strand, within DvMF_0652 at 785.536 kb on + strand, within DvMF_0652 at 785.564 kb on + strand, within DvMF_0652 at 785.569 kb on + strand, within DvMF_0652
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Bacitracin 1.4 mg/ml remove 782,303 - -0.7 782,336 - -0.9 782,336 - +0.8 782,397 - -1.8 782,505 + DvMF_0650 0.25 -0.8 782,579 - DvMF_0650 0.43 -2.1 782,621 + DvMF_0650 0.53 -1.1 782,645 - DvMF_0650 0.59 -1.9 783,088 - -1.2 783,349 - +1.8 783,383 - +1.6 783,390 - +1.7 783,524 + DvMF_0651 0.17 +2.0 783,599 - DvMF_0651 0.23 +1.9 783,731 - DvMF_0651 0.34 +1.8 783,951 - DvMF_0651 0.51 +2.6 783,956 - DvMF_0651 0.51 +2.0 784,324 - DvMF_0651 0.80 +0.5 784,369 + DvMF_0651 0.84 +1.6 784,375 + DvMF_0651 0.84 +1.2 784,383 - DvMF_0651 0.85 +1.8 784,472 - +1.7 784,893 - DvMF_0652 0.15 -1.0 785,198 - DvMF_0652 0.42 -0.7 785,371 + DvMF_0652 0.58 -0.8 785,536 + DvMF_0652 0.72 -0.5 785,564 + DvMF_0652 0.75 -0.9 785,569 + DvMF_0652 0.75 +2.7
Or see this region's nucleotide sequence