Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_0622

Experiment: MoYLS4 with Bacitracin 1.4 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDvMF_0621 and DvMF_0622 are separated by 628 nucleotidesDvMF_0622 and DvMF_0623 are separated by 751 nucleotides DvMF_0621: DvMF_0621 - methyl-accepting chemotaxis sensory transducer (RefSeq), at 741,362 to 743,545 _0621 DvMF_0622: DvMF_0622 - transcriptional regulator, BadM/Rrf2 family (RefSeq), at 744,174 to 744,716 _0622 DvMF_0623: DvMF_0623 - transcriptional regulator, BadM/Rrf2 family (RefSeq), at 745,468 to 746,037 _0623 Position (kb) 744 745Strain fitness (log2 ratio) -2 -1 0 1 2 3at 743.553 kb on + strandat 743.553 kb on + strandat 743.718 kb on + strandat 743.751 kb on - strandat 744.299 kb on - strand, within DvMF_0622at 744.718 kb on + strandat 744.726 kb on - strandat 745.038 kb on + strandat 745.184 kb on - strandat 745.519 kb on + strandat 745.519 kb on + strandat 745.522 kb on - strandat 745.529 kb on + strand, within DvMF_0623

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Per-strain Table

Position Strand Gene LocusTag Fraction MoYLS4 with Bacitracin 1.4 mg/ml
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743,553 + -0.7
743,553 + -1.0
743,718 + -0.0
743,751 - +0.3
744,299 - DvMF_0622 0.23 -1.5
744,718 + +3.2
744,726 - -2.1
745,038 + -1.7
745,184 - -0.6
745,519 + -0.2
745,519 + -1.2
745,522 - -1.1
745,529 + DvMF_0623 0.11 -0.7

Or see this region's nucleotide sequence