Experiment: MoYLS4 with Bacitracin 1.4 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0607 and DvMF_0608 are separated by 144 nucleotides DvMF_0608 and DvMF_0609 are separated by 4 nucleotides DvMF_0609 and DvMF_0610 overlap by 4 nucleotides
DvMF_0607: DvMF_0607 - GCN5-related N-acetyltransferase (RefSeq), at 718,921 to 719,877
_0607
DvMF_0608: DvMF_0608 - transcriptional regulator, NifA subfamily, Fis Family (RefSeq), at 720,022 to 721,605
_0608
DvMF_0609: DvMF_0609 - Indolepyruvate ferredoxin oxidoreductase (RefSeq), at 721,610 to 722,215
_0609
DvMF_0610: DvMF_0610 - indolepyruvate ferredoxin oxidoreductase, alpha subunit (RefSeq), at 722,212 to 724,101
_0610
Position (kb) 720
721
722 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1 at 719.113 kb on + strand, within DvMF_0607 at 719.439 kb on - strand, within DvMF_0607 at 719.544 kb on - strand, within DvMF_0607 at 719.711 kb on - strand, within DvMF_0607 at 720.076 kb on + strand at 720.316 kb on + strand, within DvMF_0608 at 720.566 kb on + strand, within DvMF_0608 at 720.598 kb on - strand, within DvMF_0608 at 721.001 kb on - strand, within DvMF_0608 at 721.160 kb on - strand, within DvMF_0608 at 721.185 kb on - strand, within DvMF_0608 at 721.920 kb on + strand, within DvMF_0609 at 722.002 kb on - strand, within DvMF_0609 at 722.128 kb on - strand, within DvMF_0609 at 722.235 kb on + strand at 722.332 kb on + strand at 722.332 kb on + strand at 722.368 kb on - strand at 722.403 kb on + strand, within DvMF_0610 at 722.541 kb on + strand, within DvMF_0610 at 722.567 kb on + strand, within DvMF_0610 at 722.598 kb on - strand, within DvMF_0610
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Bacitracin 1.4 mg/ml remove 719,113 + DvMF_0607 0.20 -0.6 719,439 - DvMF_0607 0.54 +1.3 719,544 - DvMF_0607 0.65 -1.4 719,711 - DvMF_0607 0.83 -2.2 720,076 + -3.8 720,316 + DvMF_0608 0.19 -1.5 720,566 + DvMF_0608 0.34 -3.4 720,598 - DvMF_0608 0.36 -4.8 721,001 - DvMF_0608 0.62 -3.1 721,160 - DvMF_0608 0.72 -3.4 721,185 - DvMF_0608 0.73 -5.1 721,920 + DvMF_0609 0.51 -3.9 722,002 - DvMF_0609 0.65 -2.0 722,128 - DvMF_0609 0.85 -4.7 722,235 + -2.9 722,332 + -1.6 722,332 + -1.8 722,368 - -2.1 722,403 + DvMF_0610 0.10 -3.2 722,541 + DvMF_0610 0.17 -2.4 722,567 + DvMF_0610 0.19 -1.6 722,598 - DvMF_0610 0.20 -1.9
Or see this region's nucleotide sequence