Experiment: MoYLS4 with Bacitracin 1.4 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0594 and DvMF_0595 are separated by 369 nucleotides DvMF_0595 and DvMF_0596 overlap by 4 nucleotides DvMF_0596 and DvMF_0597 overlap by 4 nucleotides
DvMF_0594: DvMF_0594 - intracellular protease, PfpI family (RefSeq), at 705,892 to 706,416
_0594
DvMF_0595: DvMF_0595 - phosphonate ABC transporter, inner membrane subunit (RefSeq), at 706,786 to 707,580
_0595
DvMF_0596: DvMF_0596 - phosphonate ABC transporter, inner membrane subunit (RefSeq), at 707,577 to 708,365
_0596
DvMF_0597: DvMF_0597 - phosphonate ABC transporter, ATPase subunit (RefSeq), at 708,362 to 709,174
_0597
Position (kb) 706
707
708 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 706.015 kb on - strand, within DvMF_0594 at 706.020 kb on - strand, within DvMF_0594 at 706.293 kb on - strand, within DvMF_0594 at 706.418 kb on + strand at 706.426 kb on - strand at 706.544 kb on + strand at 706.756 kb on - strand at 707.198 kb on + strand, within DvMF_0595 at 707.243 kb on - strand, within DvMF_0595 at 707.303 kb on + strand, within DvMF_0595 at 707.322 kb on - strand, within DvMF_0595 at 707.436 kb on + strand, within DvMF_0595 at 707.563 kb on + strand at 707.578 kb on + strand at 707.733 kb on - strand, within DvMF_0596 at 707.895 kb on + strand, within DvMF_0596 at 708.290 kb on - strand at 708.401 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Bacitracin 1.4 mg/ml remove 706,015 - DvMF_0594 0.23 -1.3 706,020 - DvMF_0594 0.24 -0.2 706,293 - DvMF_0594 0.76 -0.1 706,418 + -0.6 706,426 - -0.9 706,544 + +0.3 706,756 - -0.5 707,198 + DvMF_0595 0.52 -1.1 707,243 - DvMF_0595 0.57 -0.9 707,303 + DvMF_0595 0.65 -0.3 707,322 - DvMF_0595 0.67 +4.1 707,436 + DvMF_0595 0.82 -0.6 707,563 + -1.4 707,578 + -0.5 707,733 - DvMF_0596 0.20 -1.0 707,895 + DvMF_0596 0.40 +0.7 708,290 - -3.4 708,401 - -0.5
Or see this region's nucleotide sequence