Experiment: MoYLS4 with Bacitracin 1.4 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0473 and DvMF_0474 are separated by 168 nucleotides DvMF_0474 and DvMF_0475 are separated by 0 nucleotides DvMF_0475 and DvMF_0476 are separated by 217 nucleotides
DvMF_0473: DvMF_0473 - hypoxanthine phosphoribosyltransferase (RefSeq), at 555,775 to 556,314
_0473
DvMF_0474: DvMF_0474 - acetyltransferase (RefSeq), at 556,483 to 556,950
_0474
DvMF_0475: DvMF_0475 - alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen (RefSeq), at 556,951 to 557,424
_0475
DvMF_0476: DvMF_0476 - vitamin B12-dependent methionine synthase without a reactivation domain (EC 2.1.1.13) <small>(from data)</small>, at 557,642 to 560,098
_0476
Position (kb) 556
557
558 Strain fitness (log2 ratio) -2
-1
0
1
2 at 556.066 kb on - strand, within DvMF_0473 at 556.141 kb on + strand, within DvMF_0473 at 556.201 kb on + strand, within DvMF_0473 at 556.276 kb on - strand at 556.524 kb on + strand at 556.659 kb on - strand, within DvMF_0474 at 556.737 kb on + strand, within DvMF_0474 at 556.832 kb on + strand, within DvMF_0474 at 556.882 kb on + strand, within DvMF_0474 at 557.110 kb on - strand, within DvMF_0475 at 557.145 kb on - strand, within DvMF_0475 at 557.815 kb on + strand at 558.014 kb on + strand, within DvMF_0476 at 558.189 kb on + strand, within DvMF_0476 at 558.417 kb on - strand, within DvMF_0476
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Bacitracin 1.4 mg/ml remove 556,066 - DvMF_0473 0.54 +0.9 556,141 + DvMF_0473 0.68 +0.2 556,201 + DvMF_0473 0.79 -0.0 556,276 - -0.2 556,524 + -1.1 556,659 - DvMF_0474 0.38 -0.2 556,737 + DvMF_0474 0.54 -0.9 556,832 + DvMF_0474 0.75 -1.2 556,882 + DvMF_0474 0.85 -0.4 557,110 - DvMF_0475 0.34 -1.9 557,145 - DvMF_0475 0.41 -1.8 557,815 + +0.2 558,014 + DvMF_0476 0.15 +2.2 558,189 + DvMF_0476 0.22 +1.6 558,417 - DvMF_0476 0.32 +0.3
Or see this region's nucleotide sequence