Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_0051

Experiment: MoYLS4 with Bacitracin 1.4 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDvMF_0049 and DvMF_0050 are separated by 278 nucleotidesDvMF_0050 and DvMF_0051 are separated by 226 nucleotidesDvMF_0051 and DvMF_0052 are separated by 756 nucleotides DvMF_0049: DvMF_0049 - hypothetical protein (RefSeq), at 65,645 to 66,274 _0049 DvMF_0050: DvMF_0050 - RNP-1 like RNA-binding protein (RefSeq), at 66,553 to 66,819 _0050 DvMF_0051: DvMF_0051 - extracellular solute-binding protein family 3 (RefSeq), at 67,046 to 67,840 _0051 DvMF_0052: DvMF_0052 - hypothetical protein (RefSeq), at 68,597 to 68,755 _0052 Position (kb) 67 68Strain fitness (log2 ratio) -2 -1 0 1at 66.116 kb on + strand, within DvMF_0049at 66.136 kb on + strand, within DvMF_0049at 66.136 kb on + strand, within DvMF_0049at 66.271 kb on - strandat 66.439 kb on + strandat 66.500 kb on - strandat 67.057 kb on + strandat 67.072 kb on + strandat 67.211 kb on - strand, within DvMF_0051at 67.211 kb on - strand, within DvMF_0051at 67.402 kb on + strand, within DvMF_0051at 67.740 kb on - strand, within DvMF_0051at 67.839 kb on - strandat 68.206 kb on - strandat 68.346 kb on - strandat 68.541 kb on + strandat 68.543 kb on + strandat 68.606 kb on + strandat 68.784 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction MoYLS4 with Bacitracin 1.4 mg/ml
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66,116 + DvMF_0049 0.75 -1.2
66,136 + DvMF_0049 0.78 -0.3
66,136 + DvMF_0049 0.78 -0.7
66,271 - -0.7
66,439 + -1.7
66,500 - -2.0
67,057 + -1.9
67,072 + -0.6
67,211 - DvMF_0051 0.21 -1.2
67,211 - DvMF_0051 0.21 -1.5
67,402 + DvMF_0051 0.45 -1.1
67,740 - DvMF_0051 0.87 -0.8
67,839 - -1.6
68,206 - -0.6
68,346 - -0.8
68,541 + -0.4
68,543 + -1.0
68,606 + -0.9
68,784 + -0.4

Or see this region's nucleotide sequence