Experiment: L-Glutamic (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS08770 and BPHYT_RS08775 are separated by 159 nucleotides BPHYT_RS08775 and BPHYT_RS08780 are separated by 106 nucleotides BPHYT_RS08780 and BPHYT_RS08785 are separated by 94 nucleotides
BPHYT_RS08770: BPHYT_RS08770 - universal stress protein A, at 1,989,448 to 1,989,912
_RS08770
BPHYT_RS08775: BPHYT_RS08775 - membrane protein, at 1,990,072 to 1,990,734
_RS08775
BPHYT_RS08780: BPHYT_RS08780 - hypothetical protein, at 1,990,841 to 1,991,185
_RS08780
BPHYT_RS08785: BPHYT_RS08785 - LexA repressor, at 1,991,280 to 1,991,930
_RS08785
Position (kb) 1990
1991
1992 Strain fitness (log2 ratio) -1
0
1 at 1989.917 kb on + strand at 1989.918 kb on - strand at 1989.995 kb on - strand at 1990.111 kb on + strand at 1990.403 kb on + strand, within BPHYT_RS08775 at 1990.404 kb on - strand, within BPHYT_RS08775 at 1990.404 kb on - strand, within BPHYT_RS08775 at 1990.404 kb on - strand, within BPHYT_RS08775 at 1990.476 kb on + strand, within BPHYT_RS08775 at 1990.554 kb on - strand, within BPHYT_RS08775 at 1990.628 kb on + strand, within BPHYT_RS08775 at 1990.717 kb on - strand at 1991.282 kb on - strand at 1991.282 kb on - strand at 1991.594 kb on - strand, within BPHYT_RS08785 at 1991.942 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (N) remove 1,989,917 + -0.4 1,989,918 - +0.1 1,989,995 - -1.6 1,990,111 + +0.7 1,990,403 + BPHYT_RS08775 0.50 -0.2 1,990,404 - BPHYT_RS08775 0.50 -0.9 1,990,404 - BPHYT_RS08775 0.50 -0.0 1,990,404 - BPHYT_RS08775 0.50 -0.0 1,990,476 + BPHYT_RS08775 0.61 -0.5 1,990,554 - BPHYT_RS08775 0.73 -0.9 1,990,628 + BPHYT_RS08775 0.84 -0.0 1,990,717 - -1.1 1,991,282 - -1.4 1,991,282 - +0.3 1,991,594 - BPHYT_RS08785 0.48 -1.4 1,991,942 - +0.2
Or see this region's nucleotide sequence