Experiment: L-Glutamine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS26175 and AZOBR_RS26180 are separated by 276 nucleotides AZOBR_RS26180 and AZOBR_RS26185 are separated by 107 nucleotides
AZOBR_RS26175: AZOBR_RS26175 - hypothetical protein, at 18,238 to 19,353
_RS26175
AZOBR_RS26180: AZOBR_RS26180 - glycosyl transferase, at 19,630 to 20,220
_RS26180
AZOBR_RS26185: AZOBR_RS26185 - hypothetical protein, at 20,328 to 21,179
_RS26185
Position (kb) 19
20
21 Strain fitness (log2 ratio) -2
-1
0
1 at 19.030 kb on + strand, within AZOBR_RS26175 at 19.150 kb on + strand, within AZOBR_RS26175 at 19.151 kb on - strand, within AZOBR_RS26175 at 19.151 kb on - strand, within AZOBR_RS26175 at 19.151 kb on - strand, within AZOBR_RS26175 at 19.151 kb on - strand, within AZOBR_RS26175 at 19.358 kb on - strand at 19.695 kb on + strand, within AZOBR_RS26180 at 19.696 kb on - strand, within AZOBR_RS26180 at 20.021 kb on - strand, within AZOBR_RS26180 at 20.021 kb on - strand, within AZOBR_RS26180 at 20.021 kb on - strand at 20.034 kb on + strand, within AZOBR_RS26180 at 20.035 kb on - strand, within AZOBR_RS26180 at 20.035 kb on - strand, within AZOBR_RS26180 at 20.134 kb on + strand, within AZOBR_RS26180 at 20.135 kb on - strand, within AZOBR_RS26180 at 20.135 kb on - strand, within AZOBR_RS26180 at 20.215 kb on + strand at 20.215 kb on + strand at 20.268 kb on + strand at 20.269 kb on - strand at 20.842 kb on + strand, within AZOBR_RS26185 at 20.842 kb on + strand, within AZOBR_RS26185 at 20.842 kb on + strand, within AZOBR_RS26185 at 20.842 kb on + strand, within AZOBR_RS26185 at 20.930 kb on + strand, within AZOBR_RS26185 at 20.930 kb on + strand, within AZOBR_RS26185 at 20.930 kb on + strand, within AZOBR_RS26185 at 20.931 kb on - strand, within AZOBR_RS26185 at 20.931 kb on - strand, within AZOBR_RS26185 at 21.051 kb on + strand, within AZOBR_RS26185 at 21.051 kb on + strand, within AZOBR_RS26185 at 21.051 kb on + strand, within AZOBR_RS26185 at 21.051 kb on + strand, within AZOBR_RS26185 at 21.051 kb on + strand, within AZOBR_RS26185 at 21.051 kb on + strand, within AZOBR_RS26185 at 21.051 kb on + strand, within AZOBR_RS26185 at 21.052 kb on - strand, within AZOBR_RS26185 at 21.052 kb on - strand, within AZOBR_RS26185 at 21.052 kb on - strand, within AZOBR_RS26185 at 21.052 kb on - strand, within AZOBR_RS26185 at 21.052 kb on - strand, within AZOBR_RS26185 at 21.052 kb on - strand, within AZOBR_RS26185 at 21.052 kb on - strand, within AZOBR_RS26185 at 21.104 kb on - strand at 21.169 kb on + strand at 21.169 kb on + strand at 21.177 kb on + strand at 21.177 kb on + strand at 21.177 kb on + strand at 21.178 kb on - strand at 21.178 kb on - strand at 21.178 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (C) remove 19,030 + AZOBR_RS26175 0.71 -0.1 19,150 + AZOBR_RS26175 0.82 -0.1 19,151 - AZOBR_RS26175 0.82 -0.0 19,151 - AZOBR_RS26175 0.82 -0.8 19,151 - AZOBR_RS26175 0.82 -0.6 19,151 - AZOBR_RS26175 0.82 -0.6 19,358 - -0.4 19,695 + AZOBR_RS26180 0.11 -0.2 19,696 - AZOBR_RS26180 0.11 -0.9 20,021 - AZOBR_RS26180 0.66 -0.9 20,021 - AZOBR_RS26180 0.66 -0.5 20,021 - -0.0 20,034 + AZOBR_RS26180 0.68 +0.2 20,035 - AZOBR_RS26180 0.69 -0.4 20,035 - AZOBR_RS26180 0.69 -0.4 20,134 + AZOBR_RS26180 0.85 -0.1 20,135 - AZOBR_RS26180 0.85 -2.3 20,135 - AZOBR_RS26180 0.85 -0.3 20,215 + -0.5 20,215 + -0.1 20,268 + -0.0 20,269 - -0.5 20,842 + AZOBR_RS26185 0.60 -0.8 20,842 + AZOBR_RS26185 0.60 -0.5 20,842 + AZOBR_RS26185 0.60 +0.7 20,842 + AZOBR_RS26185 0.60 -0.5 20,930 + AZOBR_RS26185 0.71 -0.2 20,930 + AZOBR_RS26185 0.71 +0.7 20,930 + AZOBR_RS26185 0.71 -0.5 20,931 - AZOBR_RS26185 0.71 -0.5 20,931 - AZOBR_RS26185 0.71 -0.1 21,051 + AZOBR_RS26185 0.85 -0.3 21,051 + AZOBR_RS26185 0.85 -1.6 21,051 + AZOBR_RS26185 0.85 -0.2 21,051 + AZOBR_RS26185 0.85 +1.0 21,051 + AZOBR_RS26185 0.85 -0.6 21,051 + AZOBR_RS26185 0.85 -0.5 21,051 + AZOBR_RS26185 0.85 -0.3 21,052 - AZOBR_RS26185 0.85 +0.7 21,052 - AZOBR_RS26185 0.85 -0.6 21,052 - AZOBR_RS26185 0.85 +0.4 21,052 - AZOBR_RS26185 0.85 -0.2 21,052 - AZOBR_RS26185 0.85 +0.5 21,052 - AZOBR_RS26185 0.85 +0.1 21,052 - AZOBR_RS26185 0.85 +0.4 21,104 - -0.0 21,169 + +1.2 21,169 + -0.3 21,177 + +0.1 21,177 + +0.4 21,177 + -0.6 21,178 - -0.6 21,178 - +0.1 21,178 - +0.2
Or see this region's nucleotide sequence