Experiment: L-Glutamine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS00915 and AZOBR_RS00920 are separated by 399 nucleotides AZOBR_RS00920 and AZOBR_RS00925 are separated by 91 nucleotides
AZOBR_RS00915: AZOBR_RS00915 - nuclease, at 182,346 to 183,182
_RS00915
AZOBR_RS00920: AZOBR_RS00920 - peptidase, at 183,582 to 184,904
_RS00920
AZOBR_RS00925: AZOBR_RS00925 - guanylate cyclase, at 184,996 to 186,921
_RS00925
Position (kb) 183
184
185 Strain fitness (log2 ratio) -1
0
1
2 at 183.428 kb on + strand at 183.654 kb on + strand at 183.654 kb on + strand at 183.654 kb on + strand at 183.654 kb on + strand at 183.654 kb on + strand at 183.654 kb on + strand at 183.655 kb on - strand at 183.766 kb on - strand, within AZOBR_RS00920 at 183.766 kb on - strand, within AZOBR_RS00920 at 183.771 kb on + strand, within AZOBR_RS00920 at 183.771 kb on + strand, within AZOBR_RS00920 at 183.772 kb on - strand, within AZOBR_RS00920 at 183.772 kb on - strand, within AZOBR_RS00920 at 183.772 kb on - strand, within AZOBR_RS00920 at 184.032 kb on + strand, within AZOBR_RS00920 at 184.032 kb on + strand, within AZOBR_RS00920 at 184.032 kb on + strand, within AZOBR_RS00920 at 184.033 kb on - strand, within AZOBR_RS00920 at 184.105 kb on - strand, within AZOBR_RS00920 at 184.105 kb on - strand, within AZOBR_RS00920 at 184.245 kb on + strand, within AZOBR_RS00920 at 184.272 kb on + strand, within AZOBR_RS00920 at 184.273 kb on - strand, within AZOBR_RS00920 at 184.359 kb on + strand, within AZOBR_RS00920 at 184.359 kb on + strand, within AZOBR_RS00920 at 184.360 kb on - strand, within AZOBR_RS00920 at 184.360 kb on - strand, within AZOBR_RS00920 at 184.464 kb on + strand, within AZOBR_RS00920 at 184.464 kb on + strand, within AZOBR_RS00920 at 184.465 kb on - strand, within AZOBR_RS00920 at 184.600 kb on + strand, within AZOBR_RS00920 at 184.600 kb on + strand at 184.624 kb on - strand, within AZOBR_RS00920 at 184.731 kb on + strand, within AZOBR_RS00920 at 184.790 kb on - strand at 184.935 kb on + strand at 184.984 kb on - strand at 185.647 kb on + strand, within AZOBR_RS00925 at 185.647 kb on + strand, within AZOBR_RS00925 at 185.647 kb on + strand, within AZOBR_RS00925 at 185.648 kb on - strand, within AZOBR_RS00925 at 185.648 kb on - strand, within AZOBR_RS00925 at 185.648 kb on - strand, within AZOBR_RS00925 at 185.648 kb on - strand, within AZOBR_RS00925 at 185.710 kb on + strand, within AZOBR_RS00925 at 185.710 kb on + strand, within AZOBR_RS00925 at 185.711 kb on - strand, within AZOBR_RS00925
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (C) remove 183,428 + -0.2 183,654 + +0.8 183,654 + -0.4 183,654 + +0.5 183,654 + -0.2 183,654 + +1.5 183,654 + -0.5 183,655 - +0.7 183,766 - AZOBR_RS00920 0.14 +0.5 183,766 - AZOBR_RS00920 0.14 -0.3 183,771 + AZOBR_RS00920 0.14 +0.8 183,771 + AZOBR_RS00920 0.14 +0.1 183,772 - AZOBR_RS00920 0.14 -0.2 183,772 - AZOBR_RS00920 0.14 +0.6 183,772 - AZOBR_RS00920 0.14 +0.3 184,032 + AZOBR_RS00920 0.34 +0.7 184,032 + AZOBR_RS00920 0.34 +0.3 184,032 + AZOBR_RS00920 0.34 +0.3 184,033 - AZOBR_RS00920 0.34 +0.9 184,105 - AZOBR_RS00920 0.40 -0.0 184,105 - AZOBR_RS00920 0.40 +0.7 184,245 + AZOBR_RS00920 0.50 +0.9 184,272 + AZOBR_RS00920 0.52 -0.6 184,273 - AZOBR_RS00920 0.52 +0.7 184,359 + AZOBR_RS00920 0.59 -0.0 184,359 + AZOBR_RS00920 0.59 +0.8 184,360 - AZOBR_RS00920 0.59 +0.6 184,360 - AZOBR_RS00920 0.59 +0.4 184,464 + AZOBR_RS00920 0.67 +0.2 184,464 + AZOBR_RS00920 0.67 +0.2 184,465 - AZOBR_RS00920 0.67 +1.6 184,600 + AZOBR_RS00920 0.77 -0.2 184,600 + +2.1 184,624 - AZOBR_RS00920 0.79 +1.4 184,731 + AZOBR_RS00920 0.87 +0.0 184,790 - +0.2 184,935 + -1.3 184,984 - +1.5 185,647 + AZOBR_RS00925 0.34 -0.2 185,647 + AZOBR_RS00925 0.34 +0.7 185,647 + AZOBR_RS00925 0.34 +0.7 185,648 - AZOBR_RS00925 0.34 +0.2 185,648 - AZOBR_RS00925 0.34 +0.2 185,648 - AZOBR_RS00925 0.34 -0.4 185,648 - AZOBR_RS00925 0.34 +0.7 185,710 + AZOBR_RS00925 0.37 -0.2 185,710 + AZOBR_RS00925 0.37 +0.6 185,711 - AZOBR_RS00925 0.37 +0.1
Or see this region's nucleotide sequence