Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_29245

Experiment: Sisomicin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sisomicin 0.008 mg/ml
6,354,938	+		AO353_29240	0.49	+0.8
6,354,939	-		AO353_29240	0.49	+1.3
6,354,939	-		AO353_29240	0.49	-1.3
6,354,944	+		AO353_29240	0.49	-2.0
6,354,944	+		AO353_29240	0.49	+0.2
6,354,959	+		AO353_29240	0.50	+0.3
6,354,959	+		AO353_29240	0.50	-0.5
6,354,959	+		AO353_29240	0.50	+0.3
6,354,959	+		AO353_29240	0.50	+1.3
6,354,959	+		AO353_29240	0.50	+1.7
6,354,959	+		AO353_29240	0.50	+0.9
6,354,959	+		AO353_29240	0.50	-0.1
6,354,959	+		AO353_29240	0.50	-1.0
6,354,959	+		AO353_29240	0.50	+0.7
6,354,960	-		AO353_29240	0.51	-0.3
6,354,960	-		AO353_29240	0.51	+0.3
6,354,960	-		AO353_29240	0.51	-1.8
6,354,960	-		AO353_29240	0.51	+0.0
6,354,960	-		AO353_29240	0.51	-0.9
6,354,960	-		AO353_29240	0.51	-1.5
6,354,962	+		AO353_29240	0.51	-1.1
6,354,962	+		AO353_29240	0.51	-0.1
6,354,962	+		AO353_29240	0.51	-0.2
6,354,962	+		AO353_29240	0.51	-0.9
6,354,962	+		AO353_29240	0.51	+1.1
6,354,962	+		AO353_29240	0.51	+0.7
6,354,962	+		AO353_29240	0.51	+0.1
6,354,962	+		AO353_29240	0.51	-1.4
6,354,963	-		AO353_29240	0.51	-0.1
6,354,963	-		AO353_29240	0.51	+1.3
6,354,963	-		AO353_29240	0.51	-0.7
6,354,963	-		AO353_29240	0.51	-1.7
6,354,963	-		AO353_29240	0.51	-1.4
6,354,963	-		AO353_29240	0.51	+0.9
6,355,012	+		AO353_29240	0.55	+0.7
6,355,012	+		AO353_29240	0.55	-0.3
6,355,012	+		AO353_29240	0.55	+0.5
6,355,012	+		AO353_29240	0.55	-0.7
6,355,012	+		AO353_29240	0.55	+0.7
6,355,012	+		AO353_29240	0.55	-1.6
6,355,012	+		AO353_29240	0.55	-1.2
6,355,012	+		AO353_29240	0.55	+0.3
6,355,012	+		AO353_29240	0.55	+0.9
6,355,013	-		AO353_29240	0.55	+0.1
6,355,013	-		AO353_29240	0.55	+1.0
6,355,013	-		AO353_29240	0.55	-0.3
6,355,013	-		AO353_29240	0.55	+0.0
6,355,013	-		AO353_29240	0.55	+2.3
6,355,075	+				+1.3
6,355,075	+		AO353_29240	0.60	+0.9
6,355,076	-		AO353_29240	0.60	-0.7
6,355,140	+		AO353_29240	0.65	+0.3
6,355,140	+		AO353_29240	0.65	-1.6
6,355,140	+		AO353_29240	0.65	-1.0
6,355,140	+		AO353_29240	0.65	+0.7
6,355,141	-		AO353_29240	0.65	+2.0
6,355,141	-		AO353_29240	0.65	+1.3
6,355,141	-		AO353_29240	0.65	-0.4
6,355,141	-		AO353_29240	0.65	+0.3
6,355,141	-		AO353_29240	0.65	-0.3
6,355,160	+		AO353_29240	0.67	+0.5
6,355,164	+		AO353_29240	0.67	+0.4
6,355,164	+		AO353_29240	0.67	+1.4
6,355,164	+		AO353_29240	0.67	-1.4
6,355,164	+		AO353_29240	0.67	-2.3
6,355,164	+		AO353_29240	0.67	-0.1
6,355,164	+		AO353_29240	0.67	-0.1
6,355,164	+		AO353_29240	0.67	+0.0
6,355,165	-		AO353_29240	0.67	+0.2
6,355,165	-		AO353_29240	0.67	+0.2
6,355,165	-		AO353_29240	0.67	-0.6
6,355,169	+		AO353_29240	0.68	+0.3
6,355,169	+		AO353_29240	0.68	+0.7
6,355,169	+		AO353_29240	0.68	+1.0
6,355,169	+				+0.7
6,355,170	-		AO353_29240	0.68	-0.7
6,355,170	-		AO353_29240	0.68	+0.4
6,355,170	-		AO353_29240	0.68	+0.6
6,355,193	+		AO353_29240	0.70	-0.1
6,355,246	-		AO353_29240	0.74	+2.0
6,355,251	+		AO353_29240	0.74	-1.1
6,355,251	+		AO353_29240	0.74	-1.3
6,355,251	+		AO353_29240	0.74	-0.7
6,355,251	+		AO353_29240	0.74	+0.5
6,355,251	+		AO353_29240	0.74	-2.3
6,355,251	+		AO353_29240	0.74	-0.6
6,355,251	+		AO353_29240	0.74	-0.6
6,355,251	+		AO353_29240	0.74	+0.5
6,355,252	-		AO353_29240	0.75	+0.5
6,355,252	-		AO353_29240	0.75	-0.8
6,355,252	-		AO353_29240	0.75	+1.3
6,355,252	-		AO353_29240	0.75	-0.9
6,355,252	-		AO353_29240	0.75	-0.5
6,355,252	-		AO353_29240	0.75	-1.2
6,355,252	-		AO353_29240	0.75	-1.0
6,355,253	+		AO353_29240	0.75	+0.5
6,355,253	+		AO353_29240	0.75	-1.2
6,355,254	-		AO353_29240	0.75	-1.9
6,355,278	-		AO353_29240	0.77	-1.2
6,355,333	-		AO353_29240	0.81	-1.3
6,355,333	-		AO353_29240	0.81	+0.9
6,355,338	-		AO353_29240	0.82	+0.9
6,355,366	+		AO353_29240	0.84	+0.2
6,355,366	+		AO353_29240	0.84	-0.1
6,355,367	-		AO353_29240	0.84	+0.4
6,355,382	+		AO353_29240	0.85	-1.3
6,355,383	-		AO353_29240	0.85	+0.4
6,355,383	-		AO353_29240	0.85	-0.1
6,355,383	-		AO353_29240	0.85	-0.3
6,355,383	-		AO353_29240	0.85	-2.1
6,355,383	-		AO353_29240	0.85	+1.5
6,355,406	+		AO353_29240	0.87	+0.3
6,355,406	+		AO353_29240	0.87	+0.9
6,355,407	-		AO353_29240	0.87	-0.5
6,355,526	+				+0.6
6,355,526	+				-1.5
6,355,527	-				-1.8
6,355,527	-				-0.6
6,355,554	+				-1.9
6,355,554	+				-1.4
6,355,559	-				-2.3
6,355,607	-				-1.2
6,355,646	+				-0.1
6,355,647	-				+0.2
6,355,647	-				-1.1
6,355,678	+				-1.3
6,355,679	-				-1.8
6,355,679	-				-0.7
6,355,687	+				+0.1
6,355,687	+				-0.7
6,355,688	-				-0.5
6,355,688	-				+0.6
6,355,688	-				-0.5
6,355,748	+				+1.1
6,355,748	+				+0.3
6,355,748	+				-0.9
6,355,748	+				-0.2
6,355,749	-				+0.3
6,355,749	-				-0.3
6,355,749	-				-0.5
6,355,749	-				+1.3
6,355,749	-				-1.8
6,355,749	-				-0.3
6,355,887	+		AO353_29245	0.32	-0.9
6,355,887	+		AO353_29245	0.32	-1.2
6,355,887	+		AO353_29245	0.32	-0.5
6,355,887	+		AO353_29245	0.32	+0.6
6,355,887	+		AO353_29245	0.32	-1.4
6,355,887	+		AO353_29245	0.32	-1.1
6,355,888	-		AO353_29245	0.32	-1.1
6,355,888	-				+1.3
6,355,888	-		AO353_29245	0.32	+1.4
6,355,888	-		AO353_29245	0.32	+1.9
6,355,888	-		AO353_29245	0.32	+0.3
6,355,888	-		AO353_29245	0.32	+0.9
6,355,888	-		AO353_29245	0.32	-0.5
6,355,888	-		AO353_29245	0.32	+1.1
6,355,888	-		AO353_29245	0.32	+1.3
6,355,888	-		AO353_29245	0.32	-1.4
6,355,888	-		AO353_29245	0.32	+0.3
6,355,890	+		AO353_29245	0.32	-0.1
6,355,891	-		AO353_29245	0.33	+0.7
6,355,891	-		AO353_29245	0.33	+0.6
6,355,891	-		AO353_29245	0.33	-1.5
6,355,891	-		AO353_29245	0.33	-1.4
6,355,891	-		AO353_29245	0.33	+0.2
6,355,913	+		AO353_29245	0.37	-0.1
6,355,913	+		AO353_29245	0.37	+0.3
6,355,914	-		AO353_29245	0.37	+0.6
6,355,914	-		AO353_29245	0.37	-1.4
6,355,925	+		AO353_29245	0.39	-1.8
6,355,925	+		AO353_29245	0.39	+2.3
6,355,927	+		AO353_29245	0.39	-0.5
6,355,927	+		AO353_29245	0.39	+0.8
6,355,928	-		AO353_29245	0.40	-1.5
6,355,928	-		AO353_29245	0.40	-0.9
6,355,928	-		AO353_29245	0.40	+0.3
6,355,928	-		AO353_29245	0.40	-0.1
6,355,928	-		AO353_29245	0.40	+0.5
6,355,928	-		AO353_29245	0.40	+0.5
6,355,972	+		AO353_29245	0.48	+0.7
6,355,972	+		AO353_29245	0.48	-0.1
6,355,972	+		AO353_29245	0.48	+0.6
6,355,972	+		AO353_29245	0.48	+0.3
6,355,972	+		AO353_29245	0.48	+1.6
6,355,972	+		AO353_29245	0.48	+1.3
6,355,972	+		AO353_29245	0.48	-1.2
6,355,972	+		AO353_29245	0.48	-0.1
6,355,972	+		AO353_29245	0.48	+0.2
6,355,973	-		AO353_29245	0.48	-0.5
6,355,973	-		AO353_29245	0.48	-0.1
6,355,973	-		AO353_29245	0.48	+1.1
6,355,973	-		AO353_29245	0.48	-1.6
6,355,973	-		AO353_29245	0.48	-1.6
6,355,973	-		AO353_29245	0.48	+1.1
6,355,973	-		AO353_29245	0.48	-0.5
6,356,026	-		AO353_29245	0.58	+1.0
6,356,082	+		AO353_29245	0.69	-0.3
6,356,082	+		AO353_29245	0.69	-1.6
6,356,082	+		AO353_29245	0.69	+0.3
6,356,082	+		AO353_29245	0.69	+0.7
6,356,082	+		AO353_29245	0.69	-0.8
6,356,083	-		AO353_29245	0.69	-0.4
6,356,083	-		AO353_29245	0.69	+0.1
6,356,083	-		AO353_29245	0.69	+0.3
6,356,083	-		AO353_29245	0.69	+0.3
6,356,083	-		AO353_29245	0.69	+0.9
6,356,083	-		AO353_29245	0.69	-0.4
6,356,185	+		AO353_29245	0.88	-0.1
6,356,185	+		AO353_29245	0.88	-0.3
6,356,186	-		AO353_29245	0.88	+1.1
6,356,195	-		AO353_29245	0.90	-1.2
6,356,234	+				-0.5
6,356,239	+				-0.1
6,356,239	+				-0.3
6,356,239	+				+2.0
6,356,240	-				-1.4
6,356,240	-				-0.1
6,356,240	-				+0.9
6,356,240	-				-1.2
6,356,240	-				-0.1
6,356,243	-				-0.9
6,356,275	+				-1.4
6,356,275	+				+0.2
6,356,275	+				+1.3
6,356,275	+				+1.3
6,356,275	+				+1.0
6,356,275	+				-1.3
6,356,276	-				-2.0
6,356,276	-				-1.1
6,356,284	+				-2.2
6,356,284	+				-1.1
6,356,284	+				-1.1
6,356,284	+				-1.8
6,356,284	+				-1.3
6,356,284	+				-1.2
6,356,284	+				-2.0
6,356,284	+				+1.9
6,356,284	+				-0.9
6,356,285	-				+0.9
6,356,285	-				-0.5
6,356,285	-				+0.7
6,356,392	+				-1.8
6,356,392	+				+0.1
6,356,393	-				+0.6
6,356,393	-				-0.7
6,356,393	-				-0.9
6,356,393	-				-0.4
6,356,409	+				-2.1
6,356,525	+				-1.4
6,356,525	+				+0.3
6,356,526	-				-1.1
6,356,526	-				-0.7
6,356,536	+				+0.9
6,356,536	+				-1.5
6,356,537	-				-0.1
6,356,537	-				+0.0
6,356,537	-				-0.5
6,356,537	-				+0.5
6,356,542	+				-0.3
6,356,542	+				-1.1
6,356,542	+				+0.7
6,356,543	-				+0.6
6,356,543	-				-2.5
6,356,581	+		AO353_29250	0.21	-0.5
6,356,581	+		AO353_29250	0.21	-1.1
6,356,582	-		AO353_29250	0.21	-0.1
6,356,582	-		AO353_29250	0.21	+1.8
6,356,615	+		AO353_29250	0.33	-0.1
6,356,615	+		AO353_29250	0.33	+1.6
6,356,632	-		AO353_29250	0.40	-0.9
6,356,636	-		AO353_29250	0.41	-1.8
6,356,636	-		AO353_29250	0.41	+0.7
6,356,711	+		AO353_29250	0.68	+0.9
6,356,711	+		AO353_29250	0.68	-1.4
6,356,711	+		AO353_29250	0.68	-0.1
6,356,711	+		AO353_29250	0.68	-1.1
6,356,711	+		AO353_29250	0.68	+0.9
6,356,711	+		AO353_29250	0.68	-1.5
6,356,711	+		AO353_29250	0.68	+0.7
6,356,711	+		AO353_29250	0.68	-1.3
6,356,711	+		AO353_29250	0.68	-1.3
6,356,711	+				-0.9
6,356,711	+		AO353_29250	0.68	+0.4
6,356,711	+		AO353_29250	0.68	+1.4
6,356,711	+		AO353_29250	0.68	+0.4
6,356,711	+		AO353_29250	0.68	+0.2
6,356,711	+		AO353_29250	0.68	-0.9
6,356,712	-		AO353_29250	0.69	-1.2
6,356,712	-		AO353_29250	0.69	+0.8
6,356,712	-		AO353_29250	0.69	-0.2
6,356,712	-		AO353_29250	0.69	+0.1
6,356,712	-		AO353_29250	0.69	-1.6
6,356,712	-		AO353_29250	0.69	-0.2
6,356,712	-		AO353_29250	0.69	+0.7
6,356,712	-		AO353_29250	0.69	+0.3
6,356,712	-		AO353_29250	0.69	+0.6
6,356,712	-		AO353_29250	0.69	-1.4
6,356,712	-		AO353_29250	0.69	-0.3
6,356,712	-		AO353_29250	0.69	-0.2
6,356,724	+		AO353_29250	0.73	+0.7
6,356,725	-				-0.3
6,356,725	-		AO353_29250	0.74	+1.5
6,356,727	-		AO353_29250	0.74	+0.7
6,356,776	-				+1.2
6,356,776	-				+0.2
6,356,796	+				-1.5
6,356,796	+				+0.4
6,356,823	+				-1.4
6,356,824	-				-1.2
6,356,839	+				-0.6
6,356,840	-				+2.3
6,356,840	-				-0.1
6,356,899	+				+0.0
6,356,938	+				-0.2
6,356,938	+				+0.5
6,356,951	+				+1.0
6,356,952	-				+0.3
6,356,957	+				-1.6
6,357,037	+		AO353_29255	0.12	+0.0
6,357,037	+		AO353_29255	0.12	-1.1
6,357,037	+		AO353_29255	0.12	+1.3
6,357,037	+		AO353_29255	0.12	-1.1
6,357,037	+		AO353_29255	0.12	-0.2
6,357,037	+		AO353_29255	0.12	+0.7
6,357,038	-		AO353_29255	0.12	+0.3
6,357,038	-		AO353_29255	0.12	+2.9
6,357,038	-		AO353_29255	0.12	-1.1
6,357,058	+		AO353_29255	0.14	-1.5
6,357,059	-		AO353_29255	0.14	-3.2
6,357,059	-		AO353_29255	0.14	-2.6
6,357,059	-		AO353_29255	0.14	-1.1
6,357,059	-		AO353_29255	0.14	-0.1
6,357,059	-		AO353_29255	0.14	+0.0
6,357,059	-		AO353_29255	0.14	+0.7
6,357,089	+		AO353_29255	0.17	-1.6
6,357,089	+		AO353_29255	0.17	-2.0
6,357,089	+		AO353_29255	0.17	+1.8
6,357,089	+		AO353_29255	0.17	-1.1
6,357,089	+		AO353_29255	0.17	+0.4
6,357,089	+		AO353_29255	0.17	+0.1
6,357,089	+		AO353_29255	0.17	-1.2
6,357,089	+		AO353_29255	0.17	-1.5
6,357,089	+		AO353_29255	0.17	-2.3
6,357,089	+		AO353_29255	0.17	+0.9
6,357,089	+		AO353_29255	0.17	-0.8
6,357,089	+		AO353_29255	0.17	-1.6
6,357,089	+		AO353_29255	0.17	+1.9
6,357,089	+		AO353_29255	0.17	-0.5
6,357,090	-		AO353_29255	0.17	-1.2
6,357,090	-		AO353_29255	0.17	-0.1
6,357,090	-		AO353_29255	0.17	+3.4
6,357,090	-		AO353_29255	0.17	+1.7
6,357,090	-		AO353_29255	0.17	-0.1
6,357,090	-				+2.3
6,357,090	-		AO353_29255	0.17	-0.1
6,357,120	+		AO353_29255	0.20	+0.1
6,357,120	+		AO353_29255	0.20	-0.4
6,357,120	+		AO353_29255	0.20	+0.4
6,357,120	+		AO353_29255	0.20	+0.7
6,357,120	+		AO353_29255	0.20	-0.9
6,357,121	-		AO353_29255	0.20	-1.1
6,357,121	-		AO353_29255	0.20	+0.8
6,357,121	-		AO353_29255	0.20	+0.3
6,357,121	-		AO353_29255	0.20	-0.1
6,357,121	-		AO353_29255	0.20	+0.7
6,357,221	+		AO353_29255	0.31	-1.4
6,357,222	-		AO353_29255	0.31	+0.3
6,357,222	-		AO353_29255	0.31	+0.1
6,357,222	-		AO353_29255	0.31	+1.0