Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_28980

Experiment: Sisomicin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sisomicin 0.008 mg/ml
6,299,251	-		AO353_28970	0.75	-1.5
6,299,334	+				-2.0
6,299,334	+				-1.1
6,299,334	+				-0.2
6,299,335	-				+0.4
6,299,335	-				+1.3
6,299,419	+				-0.4
6,299,420	-				+2.3
6,299,420	-				-1.6
6,299,420	-				-0.6
6,299,513	+		AO353_28975	0.15	+0.3
6,299,513	+		AO353_28975	0.15	-1.3
6,299,536	+		AO353_28975	0.18	+0.5
6,299,536	+		AO353_28975	0.18	-0.1
6,299,537	-		AO353_28975	0.18	+0.8
6,299,550	+		AO353_28975	0.20	+0.3
6,299,550	+		AO353_28975	0.20	-0.5
6,299,551	-		AO353_28975	0.20	-0.1
6,299,551	-		AO353_28975	0.20	+1.4
6,299,551	-		AO353_28975	0.20	-0.7
6,299,563	+		AO353_28975	0.21	-0.5
6,299,563	+		AO353_28975	0.21	+0.2
6,299,563	+		AO353_28975	0.21	-0.2
6,299,563	+		AO353_28975	0.21	+1.3
6,299,563	+		AO353_28975	0.21	-0.7
6,299,563	+		AO353_28975	0.21	-0.5
6,299,563	+		AO353_28975	0.21	-1.9
6,299,563	+		AO353_28975	0.21	-0.9
6,299,564	-		AO353_28975	0.22	-2.1
6,299,564	-		AO353_28975	0.22	-1.2
6,299,578	-		AO353_28975	0.23	+1.3
6,299,620	+		AO353_28975	0.29	-0.4
6,299,620	+		AO353_28975	0.29	-2.3
6,299,620	+		AO353_28975	0.29	-0.6
6,299,620	+		AO353_28975	0.29	+1.2
6,299,620	+		AO353_28975	0.29	+1.6
6,299,620	+		AO353_28975	0.29	-1.3
6,299,620	+		AO353_28975	0.29	-0.3
6,299,620	+		AO353_28975	0.29	-0.3
6,299,621	-		AO353_28975	0.29	-2.7
6,299,621	-		AO353_28975	0.29	-0.7
6,299,621	-		AO353_28975	0.29	-0.9
6,299,621	-		AO353_28975	0.29	-0.9
6,299,621	-		AO353_28975	0.29	-0.5
6,299,621	-		AO353_28975	0.29	-1.7
6,299,621	-				+1.3
6,299,621	-		AO353_28975	0.29	-0.5
6,299,621	-		AO353_28975	0.29	+1.3
6,299,623	+		AO353_28975	0.29	-1.8
6,299,623	+		AO353_28975	0.29	-0.6
6,299,623	+		AO353_28975	0.29	+1.3
6,299,623	+		AO353_28975	0.29	+0.4
6,299,623	+		AO353_28975	0.29	-0.3
6,299,624	-		AO353_28975	0.29	-0.5
6,299,624	-		AO353_28975	0.29	-1.2
6,299,624	-		AO353_28975	0.29	-0.1
6,299,650	+		AO353_28975	0.33	-0.5
6,299,650	+		AO353_28975	0.33	-0.3
6,299,650	+		AO353_28975	0.33	-1.2
6,299,650	+		AO353_28975	0.33	+0.9
6,299,650	+		AO353_28975	0.33	+0.3
6,299,650	+		AO353_28975	0.33	-1.1
6,299,650	+		AO353_28975	0.33	+0.9
6,299,650	+		AO353_28975	0.33	+0.8
6,299,650	+		AO353_28975	0.33	-0.7
6,299,651	-		AO353_28975	0.33	-1.9
6,299,651	-		AO353_28975	0.33	+0.0
6,299,651	-		AO353_28975	0.33	+0.4
6,299,651	-		AO353_28975	0.33	-0.9
6,299,878	+		AO353_28975	0.62	+0.3
6,299,878	+		AO353_28975	0.62	+1.1
6,299,879	-		AO353_28975	0.62	+0.3
6,299,879	-		AO353_28975	0.62	-0.5
6,299,879	-		AO353_28975	0.62	-1.5
6,299,879	-		AO353_28975	0.62	+0.9
6,299,881	+		AO353_28975	0.63	+0.3
6,299,881	+		AO353_28975	0.63	-1.9
6,299,881	+		AO353_28975	0.63	-0.9
6,299,881	+		AO353_28975	0.63	-0.5
6,299,881	+		AO353_28975	0.63	-0.0
6,299,881	+		AO353_28975	0.63	-1.2
6,299,881	+		AO353_28975	0.63	+2.3
6,299,881	+		AO353_28975	0.63	-1.2
6,299,882	-		AO353_28975	0.63	-0.1
6,299,882	-		AO353_28975	0.63	+0.3
6,299,882	-		AO353_28975	0.63	+0.5
6,299,882	-		AO353_28975	0.63	-0.2
6,299,924	-		AO353_28975	0.68	-0.3
6,300,153	-				-0.1
6,300,175	+				-0.7
6,300,242	+		AO353_28980	0.11	-1.2
6,300,318	+		AO353_28980	0.24	-0.1
6,300,371	+		AO353_28980	0.33	+1.3
6,300,371	+		AO353_28980	0.33	-0.5
6,300,371	+		AO353_28980	0.33	-1.6
6,300,371	+		AO353_28980	0.33	-0.6
6,300,371	+		AO353_28980	0.33	+0.9
6,300,371	+		AO353_28980	0.33	+0.4
6,300,371	+		AO353_28980	0.33	-1.5
6,300,371	+		AO353_28980	0.33	+0.0
6,300,371	+		AO353_28980	0.33	+2.7
6,300,371	+		AO353_28980	0.33	+0.5
6,300,372	-		AO353_28980	0.33	+0.7
6,300,372	-		AO353_28980	0.33	+2.6
6,300,372	-		AO353_28980	0.33	-1.6
6,300,372	-		AO353_28980	0.33	+0.9
6,300,372	-		AO353_28980	0.33	-0.8
6,300,372	-		AO353_28980	0.33	+0.2
6,300,372	-		AO353_28980	0.33	+1.3
6,300,372	-		AO353_28980	0.33	-0.3
6,300,394	+		AO353_28980	0.37	+0.3
6,300,394	+		AO353_28980	0.37	+1.9
6,300,395	-		AO353_28980	0.37	-1.1
6,300,395	-		AO353_28980	0.37	+0.4
6,300,418	+		AO353_28980	0.41	-0.1
6,300,418	+		AO353_28980	0.41	+0.3
6,300,418	+				+2.0
6,300,419	-		AO353_28980	0.41	+0.9
6,300,419	-		AO353_28980	0.41	-1.5
6,300,419	-		AO353_28980	0.41	+1.1
6,300,419	-		AO353_28980	0.41	+0.0
6,300,419	-		AO353_28980	0.41	+1.9
6,300,419	-		AO353_28980	0.41	-1.4
6,300,419	-		AO353_28980	0.41	+0.8
6,300,530	+		AO353_28980	0.60	-0.3
6,300,530	+		AO353_28980	0.60	-0.2
6,300,530	+		AO353_28980	0.60	-1.3
6,300,531	-		AO353_28980	0.60	+0.5
6,300,544	+		AO353_28980	0.62	-1.2
6,300,544	+		AO353_28980	0.62	+1.3
6,300,545	-		AO353_28980	0.62	-2.3
6,300,551	+		AO353_28980	0.63	-0.9
6,300,552	-		AO353_28980	0.64	+0.5
6,300,567	+		AO353_28980	0.66	+0.4
6,300,667	+		AO353_28980	0.83	-0.7
6,300,667	+		AO353_28980	0.83	-0.5
6,300,667	+		AO353_28980	0.83	-0.7
6,300,667	+		AO353_28980	0.83	+1.0
6,300,667	+		AO353_28980	0.83	-0.1
6,300,667	+		AO353_28980	0.83	+2.3
6,300,668	-		AO353_28980	0.83	+0.5
6,300,668	-		AO353_28980	0.83	-0.3
6,300,668	-		AO353_28980	0.83	+0.1
6,300,668	-		AO353_28980	0.83	+0.3
6,300,668	-		AO353_28980	0.83	-2.7
6,300,668	-		AO353_28980	0.83	-1.2
6,300,668	-		AO353_28980	0.83	+0.3
6,300,668	-		AO353_28980	0.83	-0.4
6,300,749	+				-2.3
6,300,749	+				-1.6
6,300,749	+				+3.0
6,300,749	+				-0.5
6,300,750	-				+1.4
6,300,750	-				-0.8
6,300,750	-				+1.3
6,300,750	-				+1.3
6,300,750	-				+0.6
6,300,761	+				-0.5
6,300,762	-				+2.3
6,300,762	-				+0.5
6,300,892	+				+0.7
6,300,892	+				+0.6
6,300,892	+				+1.5
6,300,892	+				-0.2
6,300,892	+				+1.4
6,300,892	+				+0.1
6,300,892	+				-0.1
6,300,892	+				-0.7
6,300,892	+				-1.6
6,300,892	+				+1.3
6,300,892	+				-1.5
6,300,893	-				-2.5
6,300,893	-				+0.5
6,300,893	-				-1.1
6,300,893	-				-0.1
6,300,893	-				-0.7
6,300,893	-				-1.3
6,300,893	-				+1.9
6,300,893	-				-0.7
6,300,896	+				-0.9
6,300,896	+				-0.9
6,300,896	+				+0.9
6,300,896	+				+0.3
6,300,896	+				-1.4
6,300,897	-				+0.2
6,300,897	-				-0.5
6,300,897	-				-0.1
6,300,897	-				+0.3
6,300,897	-				+0.4
6,300,897	-				+0.3
6,300,905	+				+0.6
6,300,906	-				+0.7
6,300,906	-				-0.5
6,300,918	+				-1.2
6,300,919	-				-1.4
6,300,930	+				+1.0
6,300,930	+				-1.3
6,300,931	-				+0.3
6,300,931	-				-0.7
6,301,202	+		AO353_28985	0.49	-0.2
6,301,202	+		AO353_28985	0.49	+0.5
6,301,202	+		AO353_28985	0.49	+2.1
6,301,202	+		AO353_28985	0.49	+0.5
6,301,202	+		AO353_28985	0.49	+0.4
6,301,202	+		AO353_28985	0.49	-0.4
6,301,202	+		AO353_28985	0.49	+0.1
6,301,202	+		AO353_28985	0.49	+1.7
6,301,203	-		AO353_28985	0.49	+0.9
6,301,203	-		AO353_28985	0.49	+0.6
6,301,203	-		AO353_28985	0.49	-0.9
6,301,361	-		AO353_28985	0.86	+0.0
6,301,471	+				-0.5
6,301,472	-				+1.0
6,301,486	+				+0.5
6,301,486	+				-1.6
6,301,486	+				+0.5
6,301,725	+				+0.7
6,301,725	+				-0.4
6,301,725	+				+2.1
6,301,725	+				+1.3
6,301,725	+				-0.3
6,301,726	-				-0.9
6,301,726	-				+0.9
6,301,726	-				-0.3