Experiment: Sisomicin 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_27595 and AO353_27600 are separated by 3 nucleotides AO353_27600 and AO353_27605 overlap by 1 nucleotides AO353_27605 and AO353_27610 overlap by 4 nucleotides AO353_27610 and AO353_27615 overlap by 4 nucleotides AO353_27615 and AO353_27620 are separated by 88 nucleotides
AO353_27595: AO353_27595 - sulfurtransferase, at 6,016,038 to 6,016,430
_27595
AO353_27600: AO353_27600 - sulfur relay protein TusC, at 6,016,434 to 6,016,796
_27600
AO353_27605: AO353_27605 - sulfur relay protein DsrH, at 6,016,796 to 6,017,095
_27605
AO353_27610: AO353_27610 - sulfur relay protein TusE, at 6,017,092 to 6,017,427
_27610
AO353_27615: AO353_27615 - hypothetical protein, at 6,017,424 to 6,018,425
_27615
AO353_27620: AO353_27620 - glutathionyl-hydroquinone reductase YqjG, at 6,018,514 to 6,019,515
_27620
Position (kb)
6017
6018
6019 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 6016.439 kb on + strand at 6016.439 kb on + strand at 6017.715 kb on + strand, within AO353_27615 at 6017.715 kb on + strand, within AO353_27615 at 6017.745 kb on + strand, within AO353_27615 at 6017.746 kb on - strand, within AO353_27615 at 6017.813 kb on + strand, within AO353_27615 at 6017.813 kb on + strand, within AO353_27615 at 6017.814 kb on - strand, within AO353_27615 at 6017.814 kb on - strand, within AO353_27615 at 6017.829 kb on + strand, within AO353_27615 at 6017.829 kb on + strand, within AO353_27615 at 6017.830 kb on - strand, within AO353_27615 at 6017.830 kb on - strand, within AO353_27615 at 6017.830 kb on - strand, within AO353_27615 at 6017.830 kb on - strand, within AO353_27615 at 6018.029 kb on - strand, within AO353_27615 at 6018.177 kb on + strand, within AO353_27615 at 6018.178 kb on - strand, within AO353_27615 at 6018.178 kb on - strand, within AO353_27615 at 6018.475 kb on + strand at 6018.475 kb on + strand at 6018.475 kb on + strand at 6018.476 kb on - strand at 6018.553 kb on + strand at 6018.682 kb on + strand, within AO353_27620 at 6018.682 kb on + strand, within AO353_27620 at 6018.682 kb on + strand, within AO353_27620 at 6018.682 kb on + strand, within AO353_27620 at 6018.682 kb on + strand, within AO353_27620 at 6018.682 kb on + strand, within AO353_27620 at 6018.682 kb on + strand, within AO353_27620 at 6018.683 kb on - strand, within AO353_27620 at 6018.683 kb on - strand, within AO353_27620 at 6018.683 kb on - strand, within AO353_27620 at 6018.683 kb on - strand, within AO353_27620 at 6018.683 kb on - strand, within AO353_27620 at 6018.866 kb on - strand, within AO353_27620 at 6018.866 kb on - strand, within AO353_27620 at 6018.886 kb on + strand, within AO353_27620 at 6019.032 kb on - strand, within AO353_27620 at 6019.032 kb on - strand, within AO353_27620 at 6019.090 kb on + strand, within AO353_27620 at 6019.091 kb on - strand, within AO353_27620 at 6019.123 kb on + strand, within AO353_27620 at 6019.123 kb on + strand, within AO353_27620 at 6019.123 kb on + strand, within AO353_27620 at 6019.123 kb on + strand, within AO353_27620 at 6019.124 kb on - strand, within AO353_27620 at 6019.124 kb on - strand, within AO353_27620 at 6019.124 kb on - strand, within AO353_27620 at 6019.124 kb on - strand, within AO353_27620 at 6019.193 kb on - strand, within AO353_27620 at 6019.207 kb on + strand, within AO353_27620 at 6019.207 kb on + strand, within AO353_27620 at 6019.207 kb on + strand, within AO353_27620 at 6019.208 kb on - strand, within AO353_27620 at 6019.208 kb on - strand, within AO353_27620 at 6019.208 kb on - strand, within AO353_27620 at 6019.208 kb on - strand, within AO353_27620 at 6019.208 kb on - strand, within AO353_27620 at 6019.208 kb on - strand, within AO353_27620 at 6019.264 kb on + strand, within AO353_27620 at 6019.264 kb on + strand, within AO353_27620 at 6019.264 kb on + strand, within AO353_27620 at 6019.265 kb on - strand, within AO353_27620 at 6019.265 kb on - strand, within AO353_27620 at 6019.265 kb on - strand, within AO353_27620 at 6019.267 kb on + strand, within AO353_27620 at 6019.267 kb on + strand, within AO353_27620 at 6019.268 kb on - strand, within AO353_27620 at 6019.268 kb on - strand, within AO353_27620 at 6019.268 kb on - strand, within AO353_27620 at 6019.339 kb on + strand, within AO353_27620 at 6019.339 kb on + strand, within AO353_27620 at 6019.339 kb on + strand, within AO353_27620 at 6019.340 kb on - strand, within AO353_27620 at 6019.368 kb on - strand, within AO353_27620 at 6019.393 kb on + strand, within AO353_27620 at 6019.393 kb on + strand, within AO353_27620 at 6019.393 kb on + strand, within AO353_27620 at 6019.394 kb on - strand, within AO353_27620 at 6019.394 kb on - strand, within AO353_27620 at 6019.394 kb on - strand, within AO353_27620 at 6019.394 kb on - strand, within AO353_27620 at 6019.397 kb on - strand, within AO353_27620
Per-strain Table
Position Strand Gene LocusTag Fraction Sisomicin 0.008 mg/ml remove 6,016,439 + +0.2 6,016,439 + -1.3 6,017,715 + AO353_27615 0.29 -0.8 6,017,715 + AO353_27615 0.29 -0.1 6,017,745 + AO353_27615 0.32 -0.5 6,017,746 - AO353_27615 0.32 -0.9 6,017,813 + AO353_27615 0.39 -0.1 6,017,813 + AO353_27615 0.39 +0.1 6,017,814 - AO353_27615 0.39 -1.2 6,017,814 - AO353_27615 0.39 +1.2 6,017,829 + AO353_27615 0.40 -0.6 6,017,829 + AO353_27615 0.40 -1.9 6,017,830 - AO353_27615 0.41 +1.7 6,017,830 - AO353_27615 0.41 -1.8 6,017,830 - AO353_27615 0.41 +0.2 6,017,830 - AO353_27615 0.41 -0.1 6,018,029 - AO353_27615 0.60 -0.2 6,018,177 + AO353_27615 0.75 -1.2 6,018,178 - AO353_27615 0.75 -1.4 6,018,178 - AO353_27615 0.75 +0.2 6,018,475 + +1.0 6,018,475 + -1.1 6,018,475 + +1.2 6,018,476 - +0.6 6,018,553 + -1.1 6,018,682 + AO353_27620 0.17 -0.6 6,018,682 + AO353_27620 0.17 +0.1 6,018,682 + AO353_27620 0.17 -1.7 6,018,682 + AO353_27620 0.17 -0.4 6,018,682 + AO353_27620 0.17 -2.9 6,018,682 + AO353_27620 0.17 +0.4 6,018,682 + AO353_27620 0.17 -0.6 6,018,683 - AO353_27620 0.17 +0.6 6,018,683 - AO353_27620 0.17 -0.9 6,018,683 - AO353_27620 0.17 -0.9 6,018,683 - AO353_27620 0.17 +0.8 6,018,683 - AO353_27620 0.17 -0.6 6,018,866 - AO353_27620 0.35 +0.6 6,018,866 - AO353_27620 0.35 -0.9 6,018,886 + AO353_27620 0.37 +0.3 6,019,032 - AO353_27620 0.52 -0.4 6,019,032 - AO353_27620 0.52 -1.6 6,019,090 + AO353_27620 0.57 -1.2 6,019,091 - AO353_27620 0.58 -0.6 6,019,123 + AO353_27620 0.61 -1.4 6,019,123 + AO353_27620 0.61 +1.2 6,019,123 + AO353_27620 0.61 +0.4 6,019,123 + AO353_27620 0.61 -0.8 6,019,124 - AO353_27620 0.61 +0.4 6,019,124 - AO353_27620 0.61 +2.4 6,019,124 - AO353_27620 0.61 -1.9 6,019,124 - AO353_27620 0.61 -0.6 6,019,193 - AO353_27620 0.68 +0.8 6,019,207 + AO353_27620 0.69 -0.1 6,019,207 + AO353_27620 0.69 +0.4 6,019,207 + AO353_27620 0.69 -1.0 6,019,208 - AO353_27620 0.69 -1.2 6,019,208 - AO353_27620 0.69 +1.5 6,019,208 - AO353_27620 0.69 +0.4 6,019,208 - AO353_27620 0.69 -0.4 6,019,208 - AO353_27620 0.69 -1.5 6,019,208 - AO353_27620 0.69 +0.2 6,019,264 + AO353_27620 0.75 +0.1 6,019,264 + AO353_27620 0.75 +0.1 6,019,264 + AO353_27620 0.75 -1.6 6,019,265 - AO353_27620 0.75 +0.4 6,019,265 - AO353_27620 0.75 -1.2 6,019,265 - AO353_27620 0.75 -0.9 6,019,267 + AO353_27620 0.75 +1.6 6,019,267 + AO353_27620 0.75 +0.4 6,019,268 - AO353_27620 0.75 -0.1 6,019,268 - AO353_27620 0.75 -1.2 6,019,268 - AO353_27620 0.75 +0.8 6,019,339 + AO353_27620 0.82 +0.6 6,019,339 + AO353_27620 0.82 -0.1 6,019,339 + AO353_27620 0.82 -2.6 6,019,340 - AO353_27620 0.82 -0.9 6,019,368 - AO353_27620 0.85 +0.6 6,019,393 + AO353_27620 0.88 -1.2 6,019,393 + AO353_27620 0.88 -1.2 6,019,393 + AO353_27620 0.88 -1.2 6,019,394 - AO353_27620 0.88 -0.0 6,019,394 - AO353_27620 0.88 -1.4 6,019,394 - AO353_27620 0.88 +0.4 6,019,394 - AO353_27620 0.88 -0.0 6,019,397 - AO353_27620 0.88 -1.4
Or see this region's nucleotide sequence