Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_25570

Experiment: Sisomicin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sisomicin 0.008 mg/ml
5,640,250	+				-0.7
5,640,251	-				+1.1
5,640,251	-				+0.1
5,640,307	+				+0.1
5,640,351	+				-0.1
5,640,352	-				-1.5
5,640,352	-				+0.1
5,640,388	+				-2.3
5,640,388	+				+0.7
5,640,441	+		AO353_25570	0.11	-0.5
5,640,441	+		AO353_25570	0.11	-1.0
5,640,441	+		AO353_25570	0.11	-1.8
5,640,441	+		AO353_25570	0.11	-1.3
5,640,442	-		AO353_25570	0.11	-1.7
5,640,453	+		AO353_25570	0.12	-1.9
5,640,454	-		AO353_25570	0.12	-1.5
5,640,462	+		AO353_25570	0.12	-0.2
5,640,462	+		AO353_25570	0.12	+0.5
5,640,486	-		AO353_25570	0.14	-1.3
5,640,518	-		AO353_25570	0.16	-2.1
5,640,518	-		AO353_25570	0.16	-0.9
5,640,518	-		AO353_25570	0.16	-1.7
5,640,518	-		AO353_25570	0.16	-0.7
5,640,518	-		AO353_25570	0.16	-0.5
5,640,580	-		AO353_25570	0.20	-0.2
5,640,597	+		AO353_25570	0.21	-2.3
5,640,598	-		AO353_25570	0.21	+0.1
5,640,647	+		AO353_25570	0.24	-2.3
5,640,647	+		AO353_25570	0.24	-0.8
5,640,648	-		AO353_25570	0.24	+0.4
5,640,648	-		AO353_25570	0.24	-0.7
5,640,717	+		AO353_25570	0.28	+0.7
5,640,717	+		AO353_25570	0.28	-1.1
5,640,718	-		AO353_25570	0.28	-0.9
5,640,718	-		AO353_25570	0.28	-1.2
5,640,718	-		AO353_25570	0.28	-0.3
5,640,718	-		AO353_25570	0.28	-2.1
5,640,718	-		AO353_25570	0.28	-0.5
5,640,727	-		AO353_25570	0.29	-1.7
5,640,770	-		AO353_25570	0.31	-1.5
5,640,846	+		AO353_25570	0.36	+0.5
5,640,846	+		AO353_25570	0.36	+1.1
5,640,846	+		AO353_25570	0.36	-0.9
5,640,846	+		AO353_25570	0.36	-0.7
5,640,849	+		AO353_25570	0.36	-0.9
5,640,849	+		AO353_25570	0.36	+0.5
5,640,850	-		AO353_25570	0.36	+1.1
5,640,850	-		AO353_25570	0.36	-0.2
5,641,065	+		AO353_25570	0.50	-1.1
5,641,065	+		AO353_25570	0.50	-0.8
5,641,065	+		AO353_25570	0.50	-2.1
5,641,065	+		AO353_25570	0.50	-0.7
5,641,065	+		AO353_25570	0.50	-1.2
5,641,065	+		AO353_25570	0.50	-0.7
5,641,066	-		AO353_25570	0.50	+1.5
5,641,066	-		AO353_25570	0.50	-0.5
5,641,066	-		AO353_25570	0.50	-0.5
5,641,066	-		AO353_25570	0.50	-2.4
5,641,224	+		AO353_25570	0.60	+0.5
5,641,224	+		AO353_25570	0.60	-0.2
5,641,224	+		AO353_25570	0.60	-1.3
5,641,225	-		AO353_25570	0.60	-0.7
5,641,225	-		AO353_25570	0.60	-0.2
5,641,225	-		AO353_25570	0.60	-1.1
5,641,521	+		AO353_25570	0.78	-0.9
5,641,521	+		AO353_25570	0.78	-0.5
5,641,521	+				+0.5
5,641,521	+		AO353_25570	0.78	-1.9
5,641,522	-		AO353_25570	0.78	-1.6
5,641,522	-		AO353_25570	0.78	-0.5
5,641,522	-		AO353_25570	0.78	+0.9
5,641,569	-		AO353_25570	0.81	+0.2
5,641,569	-		AO353_25570	0.81	+2.5
5,641,569	-		AO353_25570	0.81	+0.1
5,641,569	-		AO353_25570	0.81	+0.5
5,641,574	+		AO353_25570	0.81	-3.0
5,641,764	+				-0.5
5,641,836	+				-2.1
5,641,836	+				+0.1
5,641,901	+				+1.5
5,641,902	-				+1.7
5,641,902	-				+0.1
5,642,066	-		AO353_25575	0.29	+1.4
5,642,154	-		AO353_25575	0.46	-0.7
5,642,229	+		AO353_25575	0.60	-1.5
5,642,229	+		AO353_25575	0.60	-1.5
5,642,230	-		AO353_25575	0.61	-1.0
5,642,230	-		AO353_25575	0.61	-0.5
5,642,301	+		AO353_25575	0.74	-1.3
5,642,302	-		AO353_25575	0.74	-0.6
5,642,302	-		AO353_25575	0.74	+1.4
5,642,302	-				+1.1
5,642,379	-		AO353_25575	0.89	-0.9
5,642,418	+				+2.1
5,642,441	-				+1.5
5,642,441	-				-0.5
5,642,441	-				-0.7
5,642,441	-				+0.4
5,642,441	-				-0.0
5,642,445	-				-0.5
5,642,457	+				+0.5
5,642,545	-				-0.9
5,642,572	+				-0.2
5,642,573	-				-1.0
5,642,573	-				-1.0
5,642,594	-				-0.9
5,642,624	-				-1.0
5,642,624	-				-0.2
5,642,626	-				-0.4
5,642,626	-				+1.0
5,642,626	-				-1.2
5,642,626	-				-1.3
5,642,658	+				+0.3
5,642,796	+		AO353_25580	0.10	+0.3
5,642,796	+		AO353_25580	0.10	-1.3
5,642,796	+		AO353_25580	0.10	-1.5
5,642,797	-		AO353_25580	0.10	-0.5
5,642,861	+		AO353_25580	0.17	+0.5
5,642,861	+		AO353_25580	0.17	+0.1
5,642,862	-		AO353_25580	0.17	-1.5
5,642,862	-		AO353_25580	0.17	+1.1