Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_23450

Experiment: Sisomicin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sisomicin 0.008 mg/ml
5,135,164	-		AO353_23440	0.49	-0.2
5,135,164	-		AO353_23440	0.49	-1.5
5,135,219	+		AO353_23440	0.58	+1.2
5,135,219	+		AO353_23440	0.58	-0.4
5,135,393	+		AO353_23440	0.88	+1.6
5,135,458	-				-0.2
5,135,497	+				+0.9
5,135,497	+				+1.9
5,135,498	-				-0.3
5,135,498	-				+1.2
5,135,498	-				+1.4
5,135,858	-		AO353_23445	0.85	-0.4
5,135,884	+				-1.4
5,135,884	+				-1.6
5,135,884	+				+0.6
5,135,884	+				-1.6
5,135,884	+				-0.0
5,135,884	+				-0.8
5,135,884	+				+0.2
5,135,885	-				-1.2
5,135,885	-				-0.0
5,135,885	-				+1.2
5,135,885	-				+1.4
5,135,885	-				-0.2
5,135,885	-				-1.7
5,135,885	-				-0.4
5,135,885	-				-0.5
5,135,885	-				-1.9
5,135,885	-				-1.2
5,136,076	-				-0.6
5,136,358	+		AO353_23450	0.38	-1.2
5,136,358	+		AO353_23450	0.38	+1.7
5,136,359	-		AO353_23450	0.38	-1.4
5,136,574	+		AO353_23450	0.63	-1.2
5,136,574	+		AO353_23450	0.63	-0.6
5,136,575	-		AO353_23450	0.63	+1.2
5,136,575	-		AO353_23450	0.63	-0.8
5,136,765	+		AO353_23450	0.85	+0.6
5,136,766	-		AO353_23450	0.85	-0.2
5,136,766	-		AO353_23450	0.85	-0.8
5,136,848	+				-1.4
5,136,849	-				+0.2
5,136,897	+				+0.8
5,136,898	-				+1.6
5,136,927	+				-0.0
5,136,959	+				-1.2
5,136,977	+				+0.9
5,136,978	-				+0.5
5,136,978	-				-1.0
5,136,978	-				-0.0
5,136,978	-				+0.8
5,136,978	-				-0.2
5,136,978	-				-0.2
5,136,978	-				-1.2
5,136,978	-				-1.5
5,136,978	-				-0.8
5,137,071	+				-1.3
5,137,071	+				-0.3
5,137,071	+				-0.4
5,137,072	-				-0.4
5,137,072	-				+2.0
5,137,072	-				-0.2
5,137,072	-				-0.4
5,137,248	-		AO353_23455	0.28	+0.1
5,137,293	+		AO353_23455	0.34	-0.0
5,137,298	+		AO353_23455	0.35	-0.8
5,137,298	+		AO353_23455	0.35	+0.2
5,137,298	+		AO353_23455	0.35	-0.6
5,137,335	-		AO353_23455	0.39	-0.4
5,137,335	-		AO353_23455	0.39	-0.6
5,137,335	-		AO353_23455	0.39	+0.6
5,137,335	-		AO353_23455	0.39	+1.3
5,137,341	+		AO353_23455	0.40	+0.2
5,137,342	-		AO353_23455	0.40	+0.2
5,137,342	-		AO353_23455	0.40	+0.4
5,137,372	-		AO353_23455	0.44	+1.1
5,137,372	-		AO353_23455	0.44	+0.7
5,137,372	-		AO353_23455	0.44	-0.4
5,137,447	-		AO353_23455	0.53	+1.2
5,137,701	+		AO353_23455	0.85	-0.2
5,137,702	-		AO353_23455	0.86	+0.5
5,137,702	-		AO353_23455	0.86	+0.8
5,137,886	+				-1.2
5,137,886	+				+2.2
5,137,887	-				-1.8
5,137,887	-				-1.2
5,137,888	+				-0.6
5,137,888	+				+0.2
5,137,888	+				-0.3
5,137,888	+				-1.8
5,137,889	-				+0.7
5,137,889	-				-0.6