Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_22840

Experiment: Sisomicin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sisomicin 0.008 mg/ml
5,006,081	+		AO353_22830	0.12	-0.0
5,006,088	-		AO353_22830	0.14	+0.2
5,006,172	+				+0.6
5,006,172	+		AO353_22830	0.34	+0.0
5,006,172	+		AO353_22830	0.34	-0.8
5,006,172	+		AO353_22830	0.34	+0.4
5,006,173	-		AO353_22830	0.34	-1.0
5,006,173	-		AO353_22830	0.34	-0.1
5,006,226	+		AO353_22830	0.47	-0.2
5,006,226	+		AO353_22830	0.47	-2.1
5,006,227	-		AO353_22830	0.47	-0.5
5,006,227	-		AO353_22830	0.47	+0.7
5,006,251	+		AO353_22830	0.53	-0.4
5,006,280	+		AO353_22830	0.60	+0.6
5,006,455	+				-0.1
5,006,488	+				-0.9
5,006,488	+				+0.2
5,006,489	-				+0.5
5,006,489	-				+0.5
5,006,489	-				+0.9
5,006,489	-				-0.2
5,006,489	-				+1.7
5,006,521	-				-2.4
5,006,521	-				-0.2
5,006,587	+				+1.9
5,006,588	-				+0.8
5,006,598	-				+0.5
5,006,650	+				-0.7
5,006,651	-				+0.2
5,006,666	+				-0.0
5,006,667	-				-1.1
5,006,734	+		AO353_22835	0.29	-1.4
5,006,735	-		AO353_22835	0.29	+0.6
5,006,735	-		AO353_22835	0.29	-1.8
5,006,735	-		AO353_22835	0.29	-2.3
5,006,735	-		AO353_22835	0.29	-0.1
5,006,821	+		AO353_22835	0.59	+0.8
5,006,821	+		AO353_22835	0.59	+0.6
5,006,821	+		AO353_22835	0.59	+0.8
5,006,821	+		AO353_22835	0.59	+0.9
5,006,822	-		AO353_22835	0.59	+1.4
5,006,822	-		AO353_22835	0.59	-0.6
5,006,822	-		AO353_22835	0.59	+0.8
5,006,822	-		AO353_22835	0.59	+0.3
5,006,822	-		AO353_22835	0.59	-0.4
5,006,822	-		AO353_22835	0.59	+0.1
5,006,910	+		AO353_22835	0.89	+3.0
5,006,911	-				+1.2
5,006,928	+				-3.1
5,006,929	-				-1.2
5,006,929	-				+0.5
5,007,006	+				+1.5
5,007,006	+				-0.2
5,007,045	+				+0.7
5,007,046	-				+2.4
5,007,046	-				-0.2
5,007,056	+				-0.6
5,007,062	+				+1.2
5,007,063	-				-0.6
5,007,063	-				-0.8
5,007,177	+				-0.2
5,007,180	+				-0.6
5,007,180	+				+1.1
5,007,181	-				+0.5
5,007,181	-				-1.7
5,007,363	+		AO353_22840	0.21	-1.5
5,007,363	+		AO353_22840	0.21	+0.3
5,007,364	-		AO353_22840	0.21	+1.4
5,007,364	-		AO353_22840	0.21	-0.8
5,007,562	-		AO353_22840	0.34	+1.1
5,007,562	-		AO353_22840	0.34	+0.5
5,007,636	+		AO353_22840	0.40	-0.0
5,007,637	-		AO353_22840	0.40	-1.4
5,007,637	-		AO353_22840	0.40	+0.7
5,007,747	+		AO353_22840	0.47	+1.9
5,007,747	+		AO353_22840	0.47	+1.6
5,007,747	+		AO353_22840	0.47	+0.0
5,007,747	+		AO353_22840	0.47	-0.5
5,007,747	+		AO353_22840	0.47	-0.6
5,007,747	+		AO353_22840	0.47	-1.4
5,007,747	+		AO353_22840	0.47	-1.9
5,007,747	+		AO353_22840	0.47	+1.6
5,007,747	+		AO353_22840	0.47	+0.0
5,007,747	+		AO353_22840	0.47	+0.0
5,007,747	+		AO353_22840	0.47	-0.6
5,007,748	-		AO353_22840	0.47	-0.8
5,007,748	-		AO353_22840	0.47	+3.2
5,007,748	-		AO353_22840	0.47	-1.6
5,007,903	-		AO353_22840	0.58	+1.5
5,008,146	+		AO353_22840	0.75	-0.1
5,008,146	+		AO353_22840	0.75	-1.7
5,008,278	+		AO353_22840	0.84	+0.0
5,008,278	+		AO353_22840	0.84	+2.2
5,008,278	+		AO353_22840	0.84	+1.2
5,008,278	+		AO353_22840	0.84	-0.2
5,008,278	+		AO353_22840	0.84	+0.1
5,008,279	-		AO353_22840	0.84	-0.5
5,008,279	-		AO353_22840	0.84	-0.4
5,008,279	-		AO353_22840	0.84	-1.9
5,008,279	-		AO353_22840	0.84	+0.5
5,008,279	-		AO353_22840	0.84	+0.5
5,008,317	+		AO353_22840	0.87	-0.6
5,008,318	-		AO353_22840	0.87	-0.4
5,008,318	-		AO353_22840	0.87	-1.2
5,008,332	+		AO353_22840	0.88	-1.1
5,008,333	-		AO353_22840	0.88	-0.8
5,008,333	-		AO353_22840	0.88	-1.0
5,008,333	-		AO353_22840	0.88	-0.4
5,008,333	-		AO353_22840	0.88	-0.8
5,008,333	-		AO353_22840	0.88	-0.6
5,008,427	+				-0.3
5,008,428	-				-1.2
5,008,428	-				-0.2
5,008,428	-				-0.8
5,008,449	+				-0.1
5,008,530	+				-1.5
5,008,530	+				-0.6
5,008,531	-				-1.8
5,008,650	+				-0.2
5,008,651	-				-0.4
5,008,668	+				+1.0
5,008,668	+				+0.6
5,008,668	+				+0.9
5,008,668	+				-1.0
5,008,668	+				-0.5
5,008,669	-				-0.1
5,008,724	+				-0.0
5,008,761	+		AO353_22845	0.14	-0.5
5,008,762	-		AO353_22845	0.14	-0.5
5,009,064	+		AO353_22845	0.72	+0.6
5,009,064	+		AO353_22845	0.72	-1.4
5,009,064	+		AO353_22845	0.72	-1.0
5,009,064	+		AO353_22845	0.72	+0.4
5,009,064	+		AO353_22845	0.72	+4.3
5,009,065	-		AO353_22845	0.72	+0.2
5,009,065	-		AO353_22845	0.72	-0.2
5,009,065	-		AO353_22845	0.72	-0.1
5,009,065	-		AO353_22845	0.72	-0.8
5,009,065	-		AO353_22845	0.72	+2.5
5,009,095	-		AO353_22845	0.78	+0.4
5,009,137	-		AO353_22845	0.86	-1.0
5,009,137	-		AO353_22845	0.86	+0.5
5,009,276	-				-1.0
5,009,305	-				+1.2
5,009,305	-				-0.7
5,009,305	-				-0.7
5,009,305	-				-1.1
5,009,389	-				-1.7
5,009,428	+				+0.0
5,009,465	+				+2.0
5,009,466	-				-1.5
5,009,466	-				+1.8
5,009,466	-				+1.1
5,009,466	-				+1.2
5,009,466	-				+1.2
5,009,466	-				+1.5
5,009,494	+				-0.2
5,009,494	+				-0.2