Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_22500

Experiment: Sisomicin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sisomicin 0.008 mg/ml
4,935,258	+		AO353_22495	0.54	+0.2
4,935,258	+		AO353_22495	0.54	-0.4
4,935,263	+		AO353_22495	0.54	+0.4
4,935,264	-		AO353_22495	0.55	-0.6
4,935,264	-		AO353_22495	0.55	+0.2
4,935,379	+		AO353_22495	0.62	+2.2
4,935,379	+		AO353_22495	0.62	-1.4
4,935,379	+		AO353_22495	0.62	+0.4
4,935,379	+		AO353_22495	0.62	-0.7
4,935,379	+		AO353_22495	0.62	+0.4
4,935,380	-		AO353_22495	0.62	-0.9
4,935,380	-		AO353_22495	0.62	+0.4
4,935,384	+		AO353_22495	0.62	-0.8
4,935,385	-		AO353_22495	0.62	+0.5
4,935,385	-		AO353_22495	0.62	-1.0
4,935,385	-		AO353_22495	0.62	+1.2
4,935,389	-		AO353_22495	0.63	-0.3
4,935,483	+		AO353_22495	0.69	-0.6
4,935,484	-		AO353_22495	0.69	+1.8
4,935,484	-		AO353_22495	0.69	+2.2
4,935,499	+				-0.4
4,935,499	+		AO353_22495	0.70	-1.5
4,935,500	-		AO353_22495	0.70	-1.6
4,935,500	-		AO353_22495	0.70	-0.3
4,935,529	+		AO353_22495	0.72	-0.4
4,935,613	+		AO353_22495	0.77	+2.2
4,935,613	+		AO353_22495	0.77	-1.5
4,935,631	-		AO353_22495	0.78	-0.1
4,935,631	-		AO353_22495	0.78	-0.8
4,935,631	-		AO353_22495	0.78	+0.6
4,935,631	-		AO353_22495	0.78	-1.5
4,935,664	-		AO353_22495	0.80	+0.3
4,935,729	+		AO353_22495	0.85	-0.1
4,935,730	-		AO353_22495	0.85	-0.6
4,935,731	+		AO353_22495	0.85	+0.2
4,935,731	+		AO353_22495	0.85	+1.2
4,935,731	+		AO353_22495	0.85	+0.0
4,935,732	-		AO353_22495	0.85	-0.5
4,935,736	-		AO353_22495	0.85	+0.6
4,935,854	+				-0.4
4,935,855	-				+0.5
4,935,879	+				-0.5
4,935,880	-				-1.0
4,935,880	-				-0.0
4,935,998	+				-1.5
4,935,999	-				-0.7
4,936,007	+				-0.0
4,936,205	+				-0.2
4,936,210	+				+0.0
4,936,210	+				-1.1
4,936,210	+				+0.8
4,936,210	+				+1.8
4,936,211	-				-0.4
4,936,247	-				-1.4
4,936,247	-				-0.6
4,936,291	+		AO353_22500	0.27	+0.6
4,936,373	+		AO353_22500	0.69	-0.4
4,936,373	+		AO353_22500	0.69	+1.9
4,936,431	-				-0.6
4,936,563	-				+0.1
4,936,573	+				+0.9
4,936,574	-				-2.2
4,936,580	+				-0.1
4,936,656	-				+0.0
4,936,684	+				-0.1
4,936,685	-				+1.8
4,936,685	-				+0.5
4,936,714	+				+0.3
4,936,714	+				+0.3
4,936,715	-				+0.2
4,936,715	-				-1.4
4,936,715	-				-0.8
4,936,715	-				-0.6
4,936,718	+				-0.6
4,936,718	+				-1.1
4,936,718	+				+1.2
4,936,718	+				-1.3
4,936,718	+				-0.8
4,936,718	+				+0.5
4,936,718	+				+1.5
4,936,719	-		AO353_22505	0.10	+0.5
4,936,719	-		AO353_22505	0.10	+0.3
4,936,719	-		AO353_22505	0.10	-0.1
4,936,719	-		AO353_22505	0.10	+0.4
4,936,719	-		AO353_22505	0.10	-1.8
4,936,719	-		AO353_22505	0.10	-0.7
4,936,719	-		AO353_22505	0.10	+1.0
4,936,719	-		AO353_22505	0.10	+2.2
4,936,719	-		AO353_22505	0.10	-1.5
4,936,725	-		AO353_22505	0.12	-0.7
4,936,768	+		AO353_22505	0.24	-1.5
4,936,768	+		AO353_22505	0.24	-2.1
4,936,768	+		AO353_22505	0.24	+1.2
4,936,768	+		AO353_22505	0.24	-0.6
4,936,768	+		AO353_22505	0.24	-0.2
4,936,768	+		AO353_22505	0.24	+2.8
4,936,769	-		AO353_22505	0.24	+0.6
4,936,769	-		AO353_22505	0.24	+0.9
4,936,776	+		AO353_22505	0.26	+0.3
4,936,776	+		AO353_22505	0.26	-0.1
4,936,777	-		AO353_22505	0.26	-0.6
4,936,797	+		AO353_22505	0.32	-0.8
4,936,797	+		AO353_22505	0.32	+2.2
4,936,797	+		AO353_22505	0.32	+0.1
4,936,797	+		AO353_22505	0.32	+2.8
4,936,797	+		AO353_22505	0.32	-0.2
4,936,798	-		AO353_22505	0.32	-0.1
4,936,798	-		AO353_22505	0.32	+1.2
4,936,798	-		AO353_22505	0.32	+0.1
4,936,800	+		AO353_22505	0.33	-0.6
4,936,801	-		AO353_22505	0.33	+0.2
4,936,801	-		AO353_22505	0.33	+1.6
4,936,801	-		AO353_22505	0.33	-1.1
4,936,830	+		AO353_22505	0.41	+0.0
4,936,935	+		AO353_22505	0.71	-1.1
4,936,935	+		AO353_22505	0.71	+0.4
4,937,053	+				+0.8
4,937,054	-				+0.2
4,937,054	-				+0.2
4,937,054	-				-1.1
4,937,054	-				-0.4
4,937,078	-				-0.3
4,937,209	+				+1.6
4,937,209	+				-0.8
4,937,209	+				+0.8
4,937,209	+				+0.2
4,937,254	+				+1.5
4,937,254	+				-0.7
4,937,254	+				+1.5
4,937,254	+				-0.4
4,937,257	+				-0.7
4,937,257	+				+1.1
4,937,427	+				-1.8
4,937,428	-				-0.1
4,937,428	-				+0.6