Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_22435

Experiment: Sisomicin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sisomicin 0.008 mg/ml
4,915,813	-		AO353_22430	0.34	-2.3
4,915,813	-		AO353_22430	0.34	+1.1
4,915,849	-		AO353_22430	0.37	-0.4
4,915,867	+		AO353_22430	0.38	-0.4
4,915,868	-		AO353_22430	0.38	-0.7
4,915,888	+		AO353_22430	0.40	+0.6
4,915,888	+		AO353_22430	0.40	+0.7
4,915,888	+		AO353_22430	0.40	+2.6
4,915,888	+		AO353_22430	0.40	-1.4
4,915,888	+		AO353_22430	0.40	+0.2
4,915,888	+		AO353_22430	0.40	+0.1
4,915,888	+		AO353_22430	0.40	-0.5
4,915,888	+		AO353_22430	0.40	-0.6
4,915,888	+		AO353_22430	0.40	+0.2
4,915,889	-		AO353_22430	0.40	-0.5
4,915,889	-		AO353_22430	0.40	-0.5
4,915,889	-		AO353_22430	0.40	+0.5
4,915,889	-		AO353_22430	0.40	-0.1
4,915,934	-		AO353_22430	0.43	+0.8
4,915,941	-		AO353_22430	0.44	+1.2
4,915,941	-		AO353_22430	0.44	+0.6
4,915,941	-		AO353_22430	0.44	-1.6
4,915,941	-		AO353_22430	0.44	-0.1
4,915,953	+		AO353_22430	0.45	-1.2
4,915,953	+		AO353_22430	0.45	+0.0
4,915,953	+		AO353_22430	0.45	-0.7
4,915,954	-		AO353_22430	0.45	-0.1
4,916,113	-		AO353_22430	0.57	+1.0
4,916,154	+		AO353_22430	0.60	-0.1
4,916,155	-		AO353_22430	0.60	+0.9
4,916,177	+		AO353_22430	0.62	+1.8
4,916,177	+		AO353_22430	0.62	+0.6
4,916,177	+		AO353_22430	0.62	-0.8
4,916,224	+		AO353_22430	0.65	+0.9
4,916,225	-		AO353_22430	0.65	-0.3
4,916,225	-		AO353_22430	0.65	-0.1
4,916,251	+		AO353_22430	0.67	-0.5
4,916,251	+		AO353_22430	0.67	-0.6
4,916,252	-		AO353_22430	0.67	-0.8
4,916,252	-		AO353_22430	0.67	-0.2
4,916,263	+		AO353_22430	0.68	-0.3
4,916,263	+		AO353_22430	0.68	+0.2
4,916,264	-		AO353_22430	0.68	+2.6
4,916,275	+		AO353_22430	0.69	-1.0
4,916,275	+		AO353_22430	0.69	-0.8
4,916,276	-		AO353_22430	0.69	+2.1
4,916,276	-		AO353_22430	0.69	+0.2
4,916,276	-		AO353_22430	0.69	-1.4
4,916,276	-		AO353_22430	0.69	+0.6
4,916,276	-		AO353_22430	0.69	-0.6
4,916,276	-		AO353_22430	0.69	-0.1
4,916,425	+		AO353_22430	0.81	-0.4
4,916,425	+		AO353_22430	0.81	-1.3
4,916,425	+		AO353_22430	0.81	-0.9
4,916,425	+		AO353_22430	0.81	-1.9
4,916,425	+		AO353_22430	0.81	-0.9
4,916,426	-		AO353_22430	0.81	+0.6
4,916,426	-		AO353_22430	0.81	+1.8
4,916,426	-		AO353_22430	0.81	+2.2
4,916,426	-		AO353_22430	0.81	-0.4
4,916,426	-		AO353_22430	0.81	-2.1
4,916,426	-		AO353_22430	0.81	-2.0
4,916,426	-		AO353_22430	0.81	-1.1
4,916,429	+		AO353_22430	0.81	+1.6
4,916,429	+				+0.6
4,916,429	+		AO353_22430	0.81	+0.3
4,916,429	+		AO353_22430	0.81	-1.0
4,916,429	+		AO353_22430	0.81	+0.1
4,916,429	+		AO353_22430	0.81	+0.5
4,916,429	+		AO353_22430	0.81	-2.0
4,916,430	-		AO353_22430	0.81	+0.1
4,916,430	-		AO353_22430	0.81	-0.9
4,916,430	-		AO353_22430	0.81	-0.7
4,916,430	-		AO353_22430	0.81	-1.8
4,916,430	-		AO353_22430	0.81	+0.8
4,916,430	-		AO353_22430	0.81	-1.2
4,916,431	+		AO353_22430	0.81	+0.9
4,916,431	+		AO353_22430	0.81	-0.9
4,916,432	-		AO353_22430	0.81	-1.5
4,916,432	-		AO353_22430	0.81	-0.4
4,916,432	-		AO353_22430	0.81	-0.6
4,916,432	-		AO353_22430	0.81	-0.4
4,916,432	-		AO353_22430	0.81	-1.1
4,916,508	-		AO353_22430	0.87	-0.8
4,916,508	-		AO353_22430	0.87	-1.2
4,916,510	+		AO353_22430	0.87	-0.4
4,916,510	+		AO353_22430	0.87	-1.0
4,916,510	+		AO353_22430	0.87	-0.6
4,916,510	+		AO353_22430	0.87	+1.8
4,916,511	-		AO353_22430	0.87	-0.2
4,916,511	-		AO353_22430	0.87	+1.2
4,916,628	-				-0.8
4,916,818	+				+0.4
4,916,861	-		AO353_22435	0.11	+1.6
4,916,861	-		AO353_22435	0.11	+1.2
4,916,861	-		AO353_22435	0.11	-0.8
4,916,998	+		AO353_22435	0.21	+1.7
4,916,998	+		AO353_22435	0.21	+0.8
4,916,998	+		AO353_22435	0.21	-0.1
4,917,019	+		AO353_22435	0.22	+0.8
4,917,019	+		AO353_22435	0.22	-1.1
4,917,025	+		AO353_22435	0.23	+0.9
4,917,025	+		AO353_22435	0.23	+1.4
4,917,026	-		AO353_22435	0.23	-0.8
4,917,026	-		AO353_22435	0.23	+0.4
4,917,026	-		AO353_22435	0.23	-0.1
4,917,049	+		AO353_22435	0.24	-2.3
4,917,114	+		AO353_22435	0.29	-0.8
4,917,114	+		AO353_22435	0.29	-0.6
4,917,136	+		AO353_22435	0.31	+0.2
4,917,136	+		AO353_22435	0.31	-1.4
4,917,136	+		AO353_22435	0.31	+0.4
4,917,137	-		AO353_22435	0.31	-0.7
4,917,137	-		AO353_22435	0.31	+0.4
4,917,229	+		AO353_22435	0.38	-0.6
4,917,229	+		AO353_22435	0.38	-2.1
4,917,229	+		AO353_22435	0.38	-1.8
4,917,229	+		AO353_22435	0.38	+1.3
4,917,229	+		AO353_22435	0.38	-0.2
4,917,407	+		AO353_22435	0.51	+2.8
4,917,414	-		AO353_22435	0.51	+1.6
4,917,583	+		AO353_22435	0.64	-1.7
4,917,584	-		AO353_22435	0.64	+0.2
4,917,616	+		AO353_22435	0.66	-0.6
4,917,616	+		AO353_22435	0.66	-0.4
4,917,616	+		AO353_22435	0.66	+1.5
4,917,616	+		AO353_22435	0.66	-0.6
4,917,616	+		AO353_22435	0.66	+1.5
4,917,616	+		AO353_22435	0.66	-0.4
4,917,616	+		AO353_22435	0.66	+0.6
4,917,616	+		AO353_22435	0.66	-0.1
4,917,616	+		AO353_22435	0.66	-0.9
4,917,617	-		AO353_22435	0.67	-2.0
4,917,617	-		AO353_22435	0.67	-1.1
4,917,617	-		AO353_22435	0.67	-0.9
4,917,617	-		AO353_22435	0.67	-0.1
4,917,617	-		AO353_22435	0.67	+0.6
4,917,617	-		AO353_22435	0.67	-1.0
4,917,617	-		AO353_22435	0.67	+1.3
4,917,617	-		AO353_22435	0.67	+0.5
4,917,617	-		AO353_22435	0.67	-0.5
4,917,617	-		AO353_22435	0.67	-2.2
4,917,617	-		AO353_22435	0.67	-0.6
4,917,617	-		AO353_22435	0.67	-0.3
4,917,617	-		AO353_22435	0.67	-1.2
4,917,617	-		AO353_22435	0.67	-0.1
4,917,617	-		AO353_22435	0.67	-1.1
4,917,617	-		AO353_22435	0.67	-0.9
4,917,617	-		AO353_22435	0.67	+0.1
4,917,617	-		AO353_22435	0.67	+0.6
4,917,649	+		AO353_22435	0.69	-0.1
4,917,650	-		AO353_22435	0.69	+1.0
4,917,763	+		AO353_22435	0.77	+1.1
4,917,845	+		AO353_22435	0.83	-0.2
4,917,863	-		AO353_22435	0.85	+0.5
4,917,863	-		AO353_22435	0.85	-0.4
4,917,887	+		AO353_22435	0.87	-1.2
4,917,888	-		AO353_22435	0.87	-0.0
4,917,888	-		AO353_22435	0.87	+1.0
4,917,900	-		AO353_22435	0.87	+0.1
4,917,900	-		AO353_22435	0.87	-1.6
4,917,944	-				+0.6
4,917,944	-				+0.2
4,918,018	-				+0.2
4,918,162	+				-1.0
4,918,162	+				-0.1
4,918,162	+				-0.1
4,918,163	-				+0.3
4,918,163	-				+1.0
4,918,201	-				-1.7
4,918,319	+				+0.6
4,918,319	+				-0.2
4,918,411	+				-0.6
4,918,411	+				+1.1
4,918,411	+				-1.7
4,918,411	+				-0.4
4,918,412	-				+0.6
4,918,412	-				+1.0
4,918,412	-				+1.4
4,918,413	+				-1.0
4,918,413	+				+0.6
4,918,413	+				-0.1
4,918,413	+				+0.3
4,918,413	+				-0.1
4,918,414	-				-0.2
4,918,414	-				-1.2
4,918,414	-				+1.2
4,918,426	+				-1.6
4,918,427	-				+1.5
4,918,427	-				-1.1
4,918,543	+				-1.6
4,918,543	+				+0.9
4,918,544	-				-1.4
4,918,544	-				-0.1
4,918,544	-				-0.2
4,918,544	-				+2.0
4,918,544	-				+0.9
4,918,567	+				-0.4
4,918,568	-				+1.4
4,918,695	+		AO353_22440	0.18	+1.4
4,918,695	+		AO353_22440	0.18	+1.2
4,918,695	+		AO353_22440	0.18	-0.0
4,918,695	+		AO353_22440	0.18	+2.9
4,918,695	+		AO353_22440	0.18	+0.2
4,918,695	+		AO353_22440	0.18	+2.0
4,918,695	+		AO353_22440	0.18	+0.3
4,918,695	+		AO353_22440	0.18	-0.6
4,918,696	-		AO353_22440	0.18	+1.0
4,918,696	-		AO353_22440	0.18	+0.3
4,918,696	-		AO353_22440	0.18	-0.1
4,918,696	-		AO353_22440	0.18	-0.3
4,918,696	-		AO353_22440	0.18	+0.9
4,918,696	-		AO353_22440	0.18	-0.8
4,918,697	+		AO353_22440	0.18	+1.6
4,918,698	-		AO353_22440	0.18	-1.1
4,918,839	+		AO353_22440	0.38	+2.4
4,918,839	+		AO353_22440	0.38	-0.6
4,918,840	-		AO353_22440	0.38	+0.5
4,918,840	-		AO353_22440	0.38	-1.0
4,918,840	-		AO353_22440	0.38	+0.9
4,918,840	-		AO353_22440	0.38	+0.6
4,918,941	+		AO353_22440	0.52	+0.6
4,918,941	+		AO353_22440	0.52	-0.8
4,918,941	+		AO353_22440	0.52	-0.7
4,918,941	+		AO353_22440	0.52	-2.0
4,918,942	-		AO353_22440	0.52	+0.6
4,919,007	+		AO353_22440	0.61	+0.3
4,919,007	+		AO353_22440	0.61	-0.1
4,919,007	+		AO353_22440	0.61	+1.2
4,919,007	+		AO353_22440	0.61	-0.5
4,919,007	+		AO353_22440	0.61	+0.3
4,919,007	+		AO353_22440	0.61	-1.1
4,919,007	+		AO353_22440	0.61	-0.6
4,919,007	+		AO353_22440	0.61	-0.6
4,919,008	-		AO353_22440	0.61	+0.1
4,919,008	-		AO353_22440	0.61	-1.1
4,919,008	-		AO353_22440	0.61	+2.4
4,919,024	+		AO353_22440	0.63	+0.5
4,919,024	+		AO353_22440	0.63	-0.4
4,919,024	+		AO353_22440	0.63	-1.0
4,919,025	-		AO353_22440	0.64	-2.1