Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_21190

Experiment: Sisomicin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sisomicin 0.008 mg/ml
4,633,480	+				+0.6
4,633,480	+				-0.5
4,633,480	+				+1.6
4,633,480	+				-2.5
4,633,480	+				+0.5
4,633,704	-		AO353_21185	0.21	-2.4
4,633,777	-		AO353_21185	0.28	-0.9
4,633,777	-		AO353_21185	0.28	+1.1
4,633,777	-		AO353_21185	0.28	-1.3
4,633,777	-		AO353_21185	0.28	-0.9
4,633,777	-		AO353_21185	0.28	-1.5
4,633,951	-		AO353_21185	0.46	-1.0
4,633,951	-		AO353_21185	0.46	-0.9
4,633,951	-		AO353_21185	0.46	+0.1
4,633,951	-		AO353_21185	0.46	-0.4
4,633,964	+		AO353_21185	0.48	+0.3
4,633,965	-		AO353_21185	0.48	+1.1
4,633,965	-		AO353_21185	0.48	-1.7
4,633,965	-		AO353_21185	0.48	-1.2
4,633,965	-		AO353_21185	0.48	-0.6
4,634,007	+		AO353_21185	0.52	-0.3
4,634,008	-		AO353_21185	0.52	+2.0
4,634,008	-		AO353_21185	0.52	-0.3
4,634,105	+				+1.3
4,634,106	-		AO353_21185	0.62	-1.0
4,634,106	-		AO353_21185	0.62	+1.3
4,634,133	+		AO353_21185	0.65	-2.0
4,634,133	+		AO353_21185	0.65	-0.3
4,634,133	+		AO353_21185	0.65	-0.9
4,634,133	+		AO353_21185	0.65	-0.1
4,634,133	+		AO353_21185	0.65	-0.6
4,634,134	-		AO353_21185	0.65	-0.8
4,634,134	-		AO353_21185	0.65	+0.2
4,634,134	-		AO353_21185	0.65	-1.2
4,634,224	-		AO353_21185	0.74	-0.0
4,634,224	-		AO353_21185	0.74	+0.7
4,634,224	-		AO353_21185	0.74	-1.1
4,634,224	-		AO353_21185	0.74	+1.0
4,634,224	-		AO353_21185	0.74	+1.0
4,634,235	+		AO353_21185	0.75	-0.0
4,634,337	+		AO353_21185	0.86	-0.4
4,634,338	-		AO353_21185	0.86	-1.3
4,634,338	-		AO353_21185	0.86	-0.0
4,634,338	-		AO353_21185	0.86	+1.0
4,634,338	-		AO353_21185	0.86	+2.1
4,634,357	+		AO353_21185	0.88	-1.5
4,634,358	-		AO353_21185	0.88	-0.9
4,634,358	-		AO353_21185	0.88	+0.5
4,634,465	+				-0.6
4,634,465	+				-0.5
4,634,466	-				-0.0
4,634,466	-				+0.6
4,634,466	-				-0.0
4,634,472	+				-2.0
4,634,473	-				-0.9
4,634,495	+				+1.2
4,634,496	-				+0.4
4,634,496	-				-0.2
4,634,499	+				-0.2
4,634,499	+				-1.1
4,634,499	+				+1.0
4,634,500	-				+0.1
4,634,503	+				-1.1
4,634,503	+				-2.3
4,634,504	-				+0.9
4,634,504	-				+2.3
4,634,504	-				-0.9
4,634,504	-				+2.3
4,634,504	-				-0.6
4,634,508	+				-0.0
4,634,508	+				-0.7
4,634,509	-				+1.3
4,634,509	-				-0.6
4,634,535	+				-1.1
4,634,556	+				-1.2
4,634,557	-				-1.3
4,634,557	-				-0.8
4,634,557	-				+1.3
4,634,575	+		AO353_21190	0.11	+0.4
4,634,575	+		AO353_21190	0.11	-0.9
4,634,575	+		AO353_21190	0.11	-0.3
4,634,575	+		AO353_21190	0.11	+0.9
4,634,579	+		AO353_21190	0.12	-0.4
4,634,580	-		AO353_21190	0.12	-0.2
4,634,580	-		AO353_21190	0.12	-1.1
4,634,612	+		AO353_21190	0.15	+1.5
4,634,664	+		AO353_21190	0.21	+1.8
4,634,664	+		AO353_21190	0.21	-0.3
4,634,665	-		AO353_21190	0.21	-0.9
4,634,665	-		AO353_21190	0.21	-0.0
4,634,719	+		AO353_21190	0.26	+1.2
4,634,761	-		AO353_21190	0.31	-0.9
4,634,782	+		AO353_21190	0.33	+0.0
4,634,782	+		AO353_21190	0.33	-0.4
4,634,782	+		AO353_21190	0.33	+0.8
4,634,782	+		AO353_21190	0.33	-0.6
4,634,783	-		AO353_21190	0.33	-1.0
4,634,783	-		AO353_21190	0.33	+0.3
4,634,783	-		AO353_21190	0.33	+0.5
4,634,783	-		AO353_21190	0.33	+0.2
4,634,899	-		AO353_21190	0.45	-0.4
4,634,995	+		AO353_21190	0.55	-0.6
4,634,995	+		AO353_21190	0.55	-0.2
4,634,995	+		AO353_21190	0.55	+1.8
4,634,996	-		AO353_21190	0.55	+0.7
4,634,998	+		AO353_21190	0.55	+2.3
4,634,998	+		AO353_21190	0.55	+0.5
4,634,998	+		AO353_21190	0.55	-1.2
4,634,998	+		AO353_21190	0.55	-1.0
4,634,998	+		AO353_21190	0.55	-0.9
4,634,998	+		AO353_21190	0.55	-0.9
4,634,998	+		AO353_21190	0.55	-1.2
4,634,998	+		AO353_21190	0.55	+0.2
4,634,999	-		AO353_21190	0.56	+1.3
4,634,999	-		AO353_21190	0.56	-0.4
4,634,999	-		AO353_21190	0.56	-0.3
4,634,999	-		AO353_21190	0.56	+0.4
4,634,999	-		AO353_21190	0.56	-0.2
4,635,049	+		AO353_21190	0.61	-0.4
4,635,050	-		AO353_21190	0.61	-0.0
4,635,050	-		AO353_21190	0.61	-0.0
4,635,050	-		AO353_21190	0.61	-0.0
4,635,058	+		AO353_21190	0.62	-0.6
4,635,058	+		AO353_21190	0.62	+1.0
4,635,058	+				+2.6
4,635,058	+		AO353_21190	0.62	-0.5
4,635,058	+		AO353_21190	0.62	+0.1
4,635,059	-		AO353_21190	0.62	-1.2
4,635,059	-		AO353_21190	0.62	-0.3
4,635,059	-		AO353_21190	0.62	+0.7
4,635,061	+		AO353_21190	0.62	-0.7
4,635,062	-		AO353_21190	0.62	+1.0
4,635,062	-		AO353_21190	0.62	+0.2
4,635,062	-		AO353_21190	0.62	-0.1
4,635,115	+		AO353_21190	0.68	-0.8
4,635,115	+		AO353_21190	0.68	-1.5
4,635,115	+		AO353_21190	0.68	-1.3
4,635,115	+		AO353_21190	0.68	+0.8
4,635,116	-		AO353_21190	0.68	+0.3
4,635,116	-		AO353_21190	0.68	-1.6
4,635,126	+		AO353_21190	0.69	-1.5
4,635,127	-		AO353_21190	0.69	-0.9
4,635,142	-		AO353_21190	0.71	+0.2
4,635,206	+		AO353_21190	0.77	-0.3
4,635,207	-		AO353_21190	0.77	+0.1
4,635,230	-		AO353_21190	0.80	-1.2
4,635,251	+		AO353_21190	0.82	-0.0
4,635,270	+		AO353_21190	0.84	+0.5
4,635,270	+		AO353_21190	0.84	-0.5
4,635,270	+		AO353_21190	0.84	+0.7
4,635,270	+		AO353_21190	0.84	-0.9
4,635,270	+		AO353_21190	0.84	-1.8
4,635,270	+		AO353_21190	0.84	-0.3
4,635,270	+		AO353_21190	0.84	+1.7
4,635,270	+		AO353_21190	0.84	-2.0
4,635,270	+		AO353_21190	0.84	-2.0
4,635,270	+		AO353_21190	0.84	-0.7
4,635,270	+		AO353_21190	0.84	-0.8
4,635,270	+		AO353_21190	0.84	-2.4
4,635,270	+		AO353_21190	0.84	+1.0
4,635,270	+		AO353_21190	0.84	-1.5
4,635,271	-		AO353_21190	0.84	+0.4
4,635,271	-		AO353_21190	0.84	+0.5
4,635,271	-		AO353_21190	0.84	-1.0
4,635,271	-		AO353_21190	0.84	+0.7
4,635,271	-		AO353_21190	0.84	+1.6
4,635,271	-		AO353_21190	0.84	+1.3
4,635,271	-		AO353_21190	0.84	-0.3
4,635,271	-		AO353_21190	0.84	+0.9
4,635,271	-		AO353_21190	0.84	+0.1
4,635,271	-		AO353_21190	0.84	-1.6
4,635,271	-		AO353_21190	0.84	-0.6
4,635,271	-		AO353_21190	0.84	+0.1
4,635,276	-		AO353_21190	0.85	+0.3
4,635,317	+		AO353_21190	0.89	+0.5
4,635,372	+				+0.5
4,635,372	+				-0.9
4,635,372	+				-1.6
4,635,373	-				-1.4
4,635,421	+				-1.2
4,635,421	+				-0.5
4,635,422	-				-0.2
4,635,422	-				-0.9
4,635,422	-				-0.0
4,635,422	-				-0.4
4,635,422	-				+2.3
4,635,422	-				-0.0
4,635,422	-				+2.0
4,635,432	+				-1.0
4,635,432	+				-0.1
4,635,432	+				-1.0
4,635,432	+				+0.3
4,635,432	+				-0.0
4,635,432	+				-0.0
4,635,432	+				+0.7
4,635,432	+				-0.5
4,635,432	+				-1.2
4,635,432	+				+1.9
4,635,432	+				-1.3
4,635,432	+				+0.1
4,635,433	-				-0.4
4,635,433	-				+0.3
4,635,433	-				+0.3
4,635,433	-				+0.5
4,635,433	-				-0.5
4,635,433	-				+0.5
4,635,433	-				-0.3
4,635,433	-				-0.8
4,635,433	-				-0.4
4,635,433	-				-0.3
4,635,444	+				-1.1
4,635,444	+				-0.0
4,635,445	-				-0.9
4,635,445	-				+0.4
4,635,446	+				+0.8
4,635,446	+				+0.7
4,635,446	+				-0.7
4,635,447	-				+1.2
4,635,447	-				-0.3
4,635,447	-				+1.6
4,635,466	+				-1.9
4,635,466	+				+0.1
4,635,467	-				-1.0
4,635,467	-				-1.8
4,635,467	-				-0.5
4,635,558	+		AO353_21195	0.24	+1.3
4,635,558	+		AO353_21195	0.24	+1.3
4,635,559	-		AO353_21195	0.24	+0.1
4,635,559	-		AO353_21195	0.24	+0.3
4,635,559	-		AO353_21195	0.24	-0.7
4,635,573	+		AO353_21195	0.27	+0.9
4,635,573	+		AO353_21195	0.27	-0.6
4,635,573	+		AO353_21195	0.27	-0.0
4,635,573	+		AO353_21195	0.27	-0.0
4,635,573	+		AO353_21195	0.27	-1.0
4,635,573	+		AO353_21195	0.27	+1.1
4,635,573	+		AO353_21195	0.27	-1.4
4,635,573	+		AO353_21195	0.27	-0.4
4,635,573	+		AO353_21195	0.27	-1.2
4,635,573	+		AO353_21195	0.27	+1.7
4,635,573	+		AO353_21195	0.27	-0.1
4,635,573	+		AO353_21195	0.27	-0.4
4,635,573	+		AO353_21195	0.27	+0.1
4,635,574	-		AO353_21195	0.27	-1.0
4,635,574	-		AO353_21195	0.27	+1.1
4,635,574	-		AO353_21195	0.27	-0.3
4,635,574	-		AO353_21195	0.27	-0.0
4,635,574	-		AO353_21195	0.27	-0.5
4,635,575	+		AO353_21195	0.27	+1.7
4,635,575	+		AO353_21195	0.27	-2.0
4,635,575	+		AO353_21195	0.27	-0.4
4,635,575	+		AO353_21195	0.27	-0.0
4,635,575	+		AO353_21195	0.27	+0.2
4,635,576	-		AO353_21195	0.27	+1.6
4,635,576	-		AO353_21195	0.27	-0.8
4,635,577	+		AO353_21195	0.27	+0.3
4,635,578	-		AO353_21195	0.28	+0.9
4,635,578	-		AO353_21195	0.28	+0.4
4,635,578	-		AO353_21195	0.28	+0.6
4,635,578	-		AO353_21195	0.28	-0.0
4,635,692	-		AO353_21195	0.49	+0.1
4,635,878	+		AO353_21195	0.85	-1.2
4,635,878	+		AO353_21195	0.85	+0.7
4,635,879	-		AO353_21195	0.85	-2.1
4,635,915	+				-0.5
4,635,916	-				+0.6
4,635,953	+				-0.3
4,635,953	+				-0.8
4,635,953	+				+0.3
4,635,953	+				+1.0
4,635,953	+				-1.0
4,635,953	+				-0.2
4,635,953	+				-0.8
4,635,953	+				+2.3
4,635,954	-				-0.5
4,635,954	-				-1.3
4,635,954	-				-0.7
4,635,987	+				-1.4
4,635,987	+				-1.0
4,635,988	-				-0.3
4,635,988	-				-1.4
4,635,988	-				-0.3
4,635,988	-				+0.5
4,635,988	-				+0.7
4,636,034	-				+0.9
4,636,102	+				+1.3
4,636,102	+				-0.6
4,636,102	+				-2.7
4,636,103	-				-0.7
4,636,103	-				+0.7
4,636,103	-				-0.1
4,636,103	-				-0.7
4,636,103	-				+0.5
4,636,106	+		AO353_21200	0.10	-0.9
4,636,106	+		AO353_21200	0.10	-0.9
4,636,106	+		AO353_21200	0.10	-1.3
4,636,106	+		AO353_21200	0.10	-0.4
4,636,106	+		AO353_21200	0.10	+0.7
4,636,106	+		AO353_21200	0.10	-0.4
4,636,106	+		AO353_21200	0.10	-1.5
4,636,107	-		AO353_21200	0.10	-1.5
4,636,107	-		AO353_21200	0.10	+1.0
4,636,107	-		AO353_21200	0.10	-0.7
4,636,107	-		AO353_21200	0.10	+0.4
4,636,107	-		AO353_21200	0.10	-0.3
4,636,180	+		AO353_21200	0.18	-1.3
4,636,180	+		AO353_21200	0.18	+0.7
4,636,180	+		AO353_21200	0.18	+1.1
4,636,181	-		AO353_21200	0.18	-1.9
4,636,181	-		AO353_21200	0.18	-0.7
4,636,181	-		AO353_21200	0.18	-1.0
4,636,196	-		AO353_21200	0.19	+1.9
4,636,242	+		AO353_21200	0.24	+0.8
4,636,243	-		AO353_21200	0.24	-0.2
4,636,259	+		AO353_21200	0.26	-0.1
4,636,259	+		AO353_21200	0.26	+0.1
4,636,259	+		AO353_21200	0.26	+0.9
4,636,259	+		AO353_21200	0.26	-0.5
4,636,259	+				-0.0
4,636,259	+		AO353_21200	0.26	-2.0
4,636,259	+		AO353_21200	0.26	+1.7
4,636,260	-		AO353_21200	0.26	+0.1
4,636,260	-		AO353_21200	0.26	-1.0
4,636,395	-		AO353_21200	0.40	-1.0
4,636,395	-		AO353_21200	0.40	-0.5
4,636,423	+		AO353_21200	0.43	+0.1