Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_19140

Experiment: Sisomicin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sisomicin 0.008 mg/ml
4,197,618	-				+1.2
4,197,729	+				-1.0
4,197,729	+				+0.4
4,197,729	+				+0.4
4,197,729	+				+0.5
4,197,729	+				+1.1
4,197,729	+				+2.1
4,197,730	-				+0.8
4,197,730	-				+0.6
4,197,807	+		AO353_19135	0.12	+2.4
4,197,807	+		AO353_19135	0.12	+1.0
4,197,808	-		AO353_19135	0.12	+0.4
4,197,808	-		AO353_19135	0.12	+0.6
4,197,871	-		AO353_19135	0.20	-0.2
4,197,871	-		AO353_19135	0.20	-0.1
4,198,104	-		AO353_19135	0.51	+0.6
4,198,104	-		AO353_19135	0.51	-0.2
4,198,104	-		AO353_19135	0.51	-1.5
4,198,104	-		AO353_19135	0.51	-1.0
4,198,104	-		AO353_19135	0.51	-1.3
4,198,104	-		AO353_19135	0.51	-2.2
4,198,129	-		AO353_19135	0.54	-0.2
4,198,129	-		AO353_19135	0.54	-1.0
4,198,211	+		AO353_19135	0.64	+2.9
4,198,212	-		AO353_19135	0.65	+2.4
4,198,212	-		AO353_19135	0.65	+2.4
4,198,465	+				+0.8
4,198,465	+				+2.0
4,198,465	+				+3.6
4,198,465	+				+0.6
4,198,466	-				+0.8
4,198,466	-				-0.4
4,198,466	-				+0.0
4,198,466	-				-1.0
4,198,466	-				+1.2
4,198,466	-				+1.4
4,198,487	+				+2.4
4,198,487	+				+0.8
4,198,487	+				+2.8
4,198,487	+				-0.2
4,198,487	+				+1.4
4,198,488	-				-0.5
4,198,488	-				-0.1
4,198,488	-				+1.4
4,198,488	-				+1.1
4,198,503	-				-0.2
4,198,542	+				+4.4
4,198,543	-				+1.8
4,198,545	+				+1.4
4,198,547	+				+1.1
4,198,548	-				-0.4
4,198,561	+				+1.3
4,198,563	+				+0.8
4,198,563	+				+3.0
4,198,563	+				+3.0
4,198,563	+				-0.8
4,198,563	+				+2.3
4,198,563	+				+3.5
4,198,564	-				-1.0
4,198,564	-				-0.8
4,198,564	-				-1.4
4,198,573	+				+2.8
4,198,586	+				+2.4
4,198,587	-				+2.8
4,198,587	-				-1.2
4,198,587	-				+2.4
4,198,659	+		AO353_19140	0.11	+3.7
4,198,659	+		AO353_19140	0.11	+0.9
4,198,659	+		AO353_19140	0.11	+2.6
4,198,660	-		AO353_19140	0.11	-1.9
4,198,660	-		AO353_19140	0.11	-1.4
4,198,660	-		AO353_19140	0.11	+2.0
4,198,671	+		AO353_19140	0.13	+4.5
4,198,672	-		AO353_19140	0.13	-1.2
4,198,672	-		AO353_19140	0.13	-1.4
4,198,711	+		AO353_19140	0.19	-0.8
4,198,711	+		AO353_19140	0.19	+0.6
4,198,712	-		AO353_19140	0.19	+1.9
4,198,866	+		AO353_19140	0.42	+0.5
4,198,866	+		AO353_19140	0.42	+2.1
4,198,947	+		AO353_19140	0.55	+2.6
4,198,947	+		AO353_19140	0.55	+2.5
4,198,947	+		AO353_19140	0.55	+2.0
4,198,947	+		AO353_19140	0.55	+2.8
4,198,995	+		AO353_19140	0.62	+2.7
4,198,995	+		AO353_19140	0.62	+4.1
4,198,995	+		AO353_19140	0.62	+1.9
4,198,995	+		AO353_19140	0.62	+1.6
4,199,020	+		AO353_19140	0.66	+1.2
4,199,048	+		AO353_19140	0.70	+3.3
4,199,049	-		AO353_19140	0.70	-2.4
4,199,049	-		AO353_19140	0.70	-1.0
4,199,049	-		AO353_19140	0.70	-1.8
4,199,058	+		AO353_19140	0.72	+0.4
4,199,059	-		AO353_19140	0.72	+1.4
4,199,059	-		AO353_19140	0.72	+2.3
4,199,059	-		AO353_19140	0.72	+0.4
4,199,059	-		AO353_19140	0.72	+0.3
4,199,221	+				+1.8
4,199,221	+				+2.2
4,199,221	+				+1.2
4,199,222	-				+0.7
4,199,222	-				+1.4
4,199,222	-				+0.4
4,199,222	-				+0.9
4,199,222	-				+0.8
4,199,222	-				+1.0
4,199,223	+				+2.6
4,199,223	+				+1.1
4,199,223	+				-0.2
4,199,223	+				-0.3
4,199,224	-				+1.6
4,199,224	-				+0.9
4,199,224	-				-2.0
4,199,224	-				-1.0
4,199,225	+				+0.2
4,199,225	+				+1.8
4,199,225	+				+3.0
4,199,225	+				+0.0
4,199,225	+				+2.5
4,199,226	-				+0.5
4,199,226	-				-0.1
4,199,226	-				-1.3
4,199,226	-				-0.7
4,199,226	-				-0.2
4,199,226	-				+0.0
4,199,226	-				+0.8
4,199,226	-				+0.8
4,199,226	-				+1.0
4,199,569	+		AO353_19145	0.29	+10.4
4,199,604	+				+8.4
4,199,604	+		AO353_19145	0.33	+10.0
4,199,604	+		AO353_19145	0.33	+7.9
4,199,605	-		AO353_19145	0.33	+9.5
4,199,605	-		AO353_19145	0.33	+8.1
4,199,605	-		AO353_19145	0.33	+7.4
4,199,605	-		AO353_19145	0.33	+6.4
4,199,605	-		AO353_19145	0.33	+8.9
4,199,605	-		AO353_19145	0.33	+8.3
4,199,605	-		AO353_19145	0.33	+9.1
4,199,607	+		AO353_19145	0.34	+8.3
4,199,607	+		AO353_19145	0.34	+7.3
4,199,608	-		AO353_19145	0.34	+7.9
4,199,868	+		AO353_19145	0.63	+11.2
4,199,868	+		AO353_19145	0.63	+8.5
4,199,869	-		AO353_19145	0.63	+10.7
4,199,869	-		AO353_19145	0.63	+10.5
4,200,203	-				+9.7
4,200,219	+				+9.5
4,200,219	+				+7.7
4,200,220	-				-1.4
4,200,220	-				+1.3
4,200,223	+				+10.2
4,200,223	+				+9.0
4,200,223	+				+9.0
4,200,223	+				+9.9
4,200,223	+				+9.9
4,200,223	+				+9.8
4,200,223	+				+10.1
4,200,223	+				+8.5
4,200,223	+				+9.8
4,200,223	+				+9.6
4,200,223	+				+6.7
4,200,224	-				-0.6
4,200,224	-				-2.5
4,200,224	-				-2.0
4,200,224	-				-0.8
4,200,224	-				+5.1
4,200,224	-				-0.2
4,200,224	-				-1.8
4,200,224	-				-2.8
4,200,227	+				+6.3
4,200,227	+				+7.7
4,200,228	-				+0.8
4,200,228	-				-0.4
4,200,228	-				-0.9
4,200,232	+				+6.4
4,200,242	+				+10.4