Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_18830

Experiment: Sisomicin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sisomicin 0.008 mg/ml
4,139,334	+				+0.6
4,139,366	-				+0.4
4,139,366	-				+1.4
4,139,366	-				+0.8
4,139,366	-				-0.4
4,139,366	-				+1.1
4,139,366	-				-0.2
4,139,420	+		AO353_18825	0.12	-0.9
4,139,420	+		AO353_18825	0.12	+3.0
4,139,420	+		AO353_18825	0.12	-2.0
4,139,435	+		AO353_18825	0.13	+1.5
4,139,435	+		AO353_18825	0.13	+0.4
4,139,435	+		AO353_18825	0.13	+0.4
4,139,436	-		AO353_18825	0.14	-0.7
4,139,436	-		AO353_18825	0.14	-0.9
4,139,436	-		AO353_18825	0.14	-0.6
4,139,436	-		AO353_18825	0.14	+0.9
4,139,436	-		AO353_18825	0.14	-1.9
4,139,555	+		AO353_18825	0.27	+0.4
4,139,556	-		AO353_18825	0.27	+2.0
4,139,556	-		AO353_18825	0.27	-0.1
4,139,556	-		AO353_18825	0.27	-0.2
4,139,556	-		AO353_18825	0.27	+0.1
4,139,607	-		AO353_18825	0.33	+0.2
4,139,607	-		AO353_18825	0.33	+1.9
4,139,607	-		AO353_18825	0.33	-0.1
4,139,815	+		AO353_18825	0.56	-0.7
4,139,971	+		AO353_18825	0.73	-1.4
4,139,971	+		AO353_18825	0.73	-0.4
4,139,971	+		AO353_18825	0.73	+0.2
4,139,971	+		AO353_18825	0.73	-0.6
4,139,971	+		AO353_18825	0.73	-0.9
4,139,971	+		AO353_18825	0.73	-1.3
4,139,971	+		AO353_18825	0.73	-0.6
4,139,971	+		AO353_18825	0.73	-0.0
4,139,971	+		AO353_18825	0.73	-0.6
4,139,972	-		AO353_18825	0.73	+1.7
4,139,972	-		AO353_18825	0.73	-0.5
4,139,972	-		AO353_18825	0.73	-0.6
4,139,972	-		AO353_18825	0.73	-0.8
4,139,972	-		AO353_18825	0.73	+1.5
4,139,972	-		AO353_18825	0.73	-0.6
4,139,972	-		AO353_18825	0.73	-0.9
4,139,972	-		AO353_18825	0.73	-0.3
4,139,972	-		AO353_18825	0.73	+0.1
4,139,972	-		AO353_18825	0.73	+0.3
4,139,975	+		AO353_18825	0.74	+0.8
4,139,975	+		AO353_18825	0.74	-2.4
4,139,975	+		AO353_18825	0.74	-0.1
4,139,975	+		AO353_18825	0.74	-1.9
4,139,975	+		AO353_18825	0.74	-0.2
4,139,975	+		AO353_18825	0.74	-1.2
4,139,975	+		AO353_18825	0.74	-0.6
4,139,976	-		AO353_18825	0.74	-2.4
4,139,976	-		AO353_18825	0.74	+0.1
4,139,976	-		AO353_18825	0.74	+0.4
4,139,976	-		AO353_18825	0.74	-1.9
4,139,976	-		AO353_18825	0.74	-1.6
4,139,976	-		AO353_18825	0.74	+0.8
4,139,976	-		AO353_18825	0.74	-0.2
4,139,976	-		AO353_18825	0.74	+0.3
4,139,976	-		AO353_18825	0.74	+0.6
4,139,992	+		AO353_18825	0.76	+0.8
4,140,204	+				+0.4
4,140,204	+				-1.7
4,140,204	+				+2.2
4,140,204	+				-0.8
4,140,204	+				-0.9
4,140,204	+				-0.6
4,140,204	+				-1.1
4,140,204	+				+1.4
4,140,204	+				+0.6
4,140,204	+				+1.7
4,140,205	-				-0.7
4,140,205	-				-0.4
4,140,205	-				-0.2
4,140,205	-				-0.4
4,140,205	-				-1.6
4,140,205	-				+1.6
4,140,205	-				-0.8
4,140,205	-				+1.2
4,140,205	-				-1.5
4,140,205	-				+0.9
4,140,205	-				+2.8
4,140,208	+				+1.2
4,140,208	+				+0.6
4,140,208	+				-0.7
4,140,208	+				-1.1
4,140,208	+				+0.2
4,140,208	+				+0.1
4,140,208	+				-0.8
4,140,208	+				-0.8
4,140,208	+				-0.2
4,140,208	+				-0.1
4,140,209	-				+0.5
4,140,209	-				+0.8
4,140,209	-				+2.4
4,140,209	-				+0.4
4,140,209	-				+0.8
4,140,227	+				-0.1
4,140,227	+				-0.4
4,140,227	+				-0.1
4,140,228	-				-0.7
4,140,228	-				+0.5
4,140,228	-				-1.8
4,140,228	-				+0.8
4,140,286	+				-1.6
4,140,287	-				+0.7
4,140,296	-				+0.4
4,140,342	+		AO353_18830	0.11	-0.2
4,140,368	+		AO353_18830	0.17	-0.1
4,140,368	+		AO353_18830	0.17	-0.2
4,140,368	+		AO353_18830	0.17	+0.1
4,140,368	+		AO353_18830	0.17	-0.8
4,140,369	-		AO353_18830	0.17	-0.2
4,140,369	-		AO353_18830	0.17	-0.9
4,140,408	-		AO353_18830	0.25	+1.0
4,140,443	+		AO353_18830	0.32	-2.1
4,140,443	+		AO353_18830	0.32	-0.6
4,140,443	+		AO353_18830	0.32	-0.9
4,140,443	+		AO353_18830	0.32	-0.4
4,140,443	+		AO353_18830	0.32	+0.6
4,140,443	+		AO353_18830	0.32	+0.8
4,140,443	+		AO353_18830	0.32	-0.9
4,140,444	-		AO353_18830	0.32	+0.1
4,140,444	-		AO353_18830	0.32	+0.7
4,140,444	-		AO353_18830	0.32	+1.6
4,140,444	-		AO353_18830	0.32	+0.8
4,140,444	-		AO353_18830	0.32	-0.0
4,140,611	+		AO353_18830	0.67	-1.5
4,140,611	+		AO353_18830	0.67	-2.2
4,140,611	+		AO353_18830	0.67	+0.1
4,140,643	+		AO353_18830	0.73	+0.4
4,140,766	+				+0.2
4,140,766	+				-0.2
4,140,766	+				-0.2
4,140,766	+				-0.4
4,140,766	+				-1.1
4,140,767	-				-0.4
4,140,767	-				-0.7
4,140,767	-				-0.9
4,140,795	+				-0.4
4,140,795	+				-0.4
4,140,795	+				+0.4
4,140,795	+				+0.5
4,140,796	-				+1.4
4,140,796	-				+0.2
4,140,796	-				-2.1
4,140,798	+				-1.3
4,140,799	-				+1.2
4,140,799	-				-0.6
4,140,799	-				+0.5
4,140,842	+		AO353_18835	0.18	-0.4
4,140,843	-		AO353_18835	0.18	+0.6
4,140,843	-		AO353_18835	0.18	+1.2
4,141,256	+				-0.9
4,141,256	+				-0.4
4,141,256	+				+0.4
4,141,256	+				+0.8
4,141,256	+				-1.1
4,141,257	-				+0.2
4,141,257	-				-1.0
4,141,257	-				+1.2
4,141,257	-				-0.4
4,141,257	-				+0.6
4,141,257	-				-1.8
4,141,257	-				+0.6
4,141,257	-				-0.6
4,141,257	-				-2.2
4,141,257	-				-0.4
4,141,270	+				+1.3
4,141,270	+				+1.7
4,141,373	-				-0.1
4,141,373	-				+0.4
4,141,373	-				+1.8
4,141,373	-				+1.4
4,141,489	+		AO353_18840	0.37	+1.1
4,141,490	-		AO353_18840	0.37	+1.4
4,141,558	+		AO353_18840	0.58	-0.6
4,141,558	+		AO353_18840	0.58	-2.1
4,141,558	+		AO353_18840	0.58	-0.6
4,141,559	-		AO353_18840	0.58	+0.4
4,141,573	+		AO353_18840	0.62	+0.6
4,141,574	-		AO353_18840	0.62	-0.1
4,141,654	+		AO353_18840	0.87	+0.6
4,141,654	+		AO353_18840	0.87	+1.6
4,141,654	+		AO353_18840	0.87	+0.8
4,141,655	-		AO353_18840	0.87	+0.9