Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_17880

Experiment: Sisomicin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sisomicin 0.008 mg/ml
3,935,625	+		AO353_17870	0.65	-0.4
3,935,685	+		AO353_17870	0.75	-0.6
3,935,686	-		AO353_17870	0.76	+0.5
3,935,743	+		AO353_17870	0.85	+0.5
3,935,743	+		AO353_17870	0.85	+0.9
3,935,743	+		AO353_17870	0.85	+1.3
3,935,743	+		AO353_17870	0.85	+0.2
3,935,743	+		AO353_17870	0.85	-0.1
3,935,744	-		AO353_17870	0.85	-1.6
3,935,802	+				-0.8
3,935,803	-				+0.5
3,935,803	-				-0.5
3,935,803	-				-1.0
3,935,803	-				+1.2
3,935,847	+				-0.1
3,935,847	+				-0.0
3,935,847	+				-1.6
3,935,847	+				+1.8
3,935,847	+				+1.8
3,935,853	+				-1.9
3,935,853	+				+1.5
3,935,853	+				+2.5
3,935,853	+				+2.1
3,935,853	+				+0.5
3,935,854	-				-1.0
3,935,854	-				+0.7
3,935,854	-				-0.5
3,935,854	-				+0.9
3,935,854	-				-1.2
3,935,854	-				-1.1
3,935,854	-				-0.5
3,935,854	-				-0.3
3,935,871	+				+0.5
3,935,871	+				+1.5
3,935,872	-				+0.4
3,935,872	-				-1.2
3,935,956	+				+0.4
3,935,956	+				-0.9
3,935,994	+				-0.6
3,935,995	-				+0.7
3,935,995	-				-1.0
3,936,009	+				+0.7
3,936,010	-				-0.3
3,936,010	-				-1.8
3,936,010	-				-1.7
3,936,070	+				+0.7
3,936,070	+				+0.9
3,936,071	-				-2.2
3,936,248	+		AO353_17875	0.30	-0.5
3,936,248	+		AO353_17875	0.30	+1.8
3,936,248	+		AO353_17875	0.30	-1.4
3,936,249	-		AO353_17875	0.30	-0.7
3,936,249	-		AO353_17875	0.30	-0.1
3,936,249	-		AO353_17875	0.30	-0.8
3,936,249	-		AO353_17875	0.30	-1.6
3,936,251	+		AO353_17875	0.31	-1.2
3,936,251	+		AO353_17875	0.31	-0.1
3,936,251	+		AO353_17875	0.31	-0.1
3,936,251	+		AO353_17875	0.31	+0.9
3,936,251	+		AO353_17875	0.31	-1.9
3,936,252	-		AO353_17875	0.31	-1.0
3,936,252	-		AO353_17875	0.31	-0.6
3,936,252	-		AO353_17875	0.31	+1.7
3,936,252	-		AO353_17875	0.31	+0.9
3,936,252	-		AO353_17875	0.31	+0.4
3,936,252	-		AO353_17875	0.31	-1.9
3,936,252	-		AO353_17875	0.31	-0.1
3,936,252	-		AO353_17875	0.31	-1.1
3,936,338	-		AO353_17875	0.50	+0.8
3,936,496	+		AO353_17875	0.85	+0.8
3,936,496	+		AO353_17875	0.85	-1.7
3,936,497	-		AO353_17875	0.85	-0.3
3,936,497	-		AO353_17875	0.85	-2.0
3,936,573	+				+0.0
3,936,573	+				-0.2
3,936,574	-				+0.9
3,936,574	-				-0.5
3,936,574	-				-1.8
3,936,574	-				+0.3
3,936,576	+				-0.1
3,936,576	+				+0.2
3,936,576	+				+0.2
3,936,576	+				-0.5
3,936,582	+				+1.5
3,936,582	+				-0.3
3,936,583	-				-0.5
3,936,583	-				+1.5
3,936,583	-				+0.9
3,936,583	-				+0.2
3,936,583	-				-1.4
3,936,583	-				-2.4
3,936,601	+				-2.7
3,936,601	+				-0.3
3,936,601	+				+0.5
3,936,602	-				-0.3
3,936,602	-				+0.9
3,936,602	-				-1.2
3,936,602	-				-0.5
3,936,696	+				-0.9
3,936,696	+				-0.3
3,936,696	+				-1.8
3,936,696	+				-0.3
3,936,696	+				-0.7
3,936,697	-				-1.5
3,936,697	-				-3.0
3,936,697	-				-1.3
3,936,697	-				+0.2
3,936,797	+		AO353_17880	0.16	-0.8
3,936,798	-		AO353_17880	0.16	-0.2
3,936,798	-		AO353_17880	0.16	+0.5
3,936,893	+		AO353_17880	0.24	-2.0
3,936,901	-		AO353_17880	0.24	-1.6
3,937,292	+		AO353_17880	0.56	-2.6
3,937,376	+		AO353_17880	0.63	-0.1
3,937,377	-		AO353_17880	0.63	-1.0
3,937,446	+		AO353_17880	0.69	-0.8
3,937,506	-		AO353_17880	0.73	-3.3
3,937,506	-		AO353_17880	0.73	-1.0
3,937,506	-		AO353_17880	0.73	-1.0
3,937,506	-		AO353_17880	0.73	-2.3
3,937,508	+		AO353_17880	0.74	-1.0
3,937,509	-		AO353_17880	0.74	+0.5
3,937,573	+		AO353_17880	0.79	-0.8
3,937,753	+				-1.0
3,937,753	+				-0.8
3,937,754	-				-0.7
3,937,754	-				-1.3
3,937,829	+				-1.0
3,937,829	+				+1.6
3,937,829	+				-0.5
3,937,830	-				-1.4
3,937,901	-				+0.1
3,937,911	+				+0.0
3,937,911	+				+0.3
3,937,911	+				-1.4
3,937,917	+				-1.4
3,937,917	+				-0.0
3,937,917	+				-1.0
3,937,918	-				+1.3
3,937,926	+				-0.5
3,937,926	+				-1.0
3,937,927	-				-1.2
3,937,927	-				-1.3
3,937,947	-				-0.5
3,938,090	+		AO353_17885	0.22	-0.6
3,938,211	+		AO353_17885	0.54	-1.3
3,938,359	-				-0.1
3,938,359	-				+0.3
3,938,359	-				+0.8
3,938,404	+				-0.2
3,938,404	+				-1.1
3,938,406	+				-0.6
3,938,406	+				-0.1
3,938,406	+				-1.1
3,938,407	-				-1.3
3,938,407	-				+0.8
3,938,407	-				+0.6
3,938,407	-				-0.1
3,938,407	-				-1.2
3,938,407	-				-1.1
3,938,407	-				-0.8
3,938,407	-				-1.1
3,938,407	-				-0.9
3,938,407	-				+0.2
3,938,454	+				+0.2
3,938,454	+				+0.6
3,938,454	+				+0.5
3,938,454	+				-1.8
3,938,454	+				+0.2
3,938,485	+				-0.7
3,938,486	-				-1.3
3,938,500	+				+0.9
3,938,508	+		AO353_17890	0.11	+1.2
3,938,508	+		AO353_17890	0.11	+0.7
3,938,509	-		AO353_17890	0.11	-0.7
3,938,562	+		AO353_17890	0.23	-0.6
3,938,562	+		AO353_17890	0.23	-1.0
3,938,562	+		AO353_17890	0.23	-2.3
3,938,562	+		AO353_17890	0.23	+0.9
3,938,562	+		AO353_17890	0.23	-1.7
3,938,562	+		AO353_17890	0.23	-0.7
3,938,563	-		AO353_17890	0.23	+1.8
3,938,563	-		AO353_17890	0.23	-0.3
3,938,563	-		AO353_17890	0.23	-1.0
3,938,563	-		AO353_17890	0.23	-1.1
3,938,563	-		AO353_17890	0.23	+0.4
3,938,563	-		AO353_17890	0.23	-0.6
3,938,596	+		AO353_17890	0.30	-0.7
3,938,628	+		AO353_17890	0.37	-1.2
3,938,628	+		AO353_17890	0.37	-0.6
3,938,628	+		AO353_17890	0.37	-0.1
3,938,628	+		AO353_17890	0.37	+0.2
3,938,628	+		AO353_17890	0.37	+0.2
3,938,628	+		AO353_17890	0.37	-0.1
3,938,629	-		AO353_17890	0.37	+0.7
3,938,629	-		AO353_17890	0.37	+0.3
3,938,629	-		AO353_17890	0.37	-0.8
3,938,629	-		AO353_17890	0.37	-0.6
3,938,629	-		AO353_17890	0.37	+0.6
3,938,629	-		AO353_17890	0.37	+0.3
3,938,629	-		AO353_17890	0.37	+1.5
3,938,629	-		AO353_17890	0.37	+0.4
3,938,652	+		AO353_17890	0.42	+0.2
3,938,652	+		AO353_17890	0.42	-0.2
3,938,652	+		AO353_17890	0.42	-1.0
3,938,653	-		AO353_17890	0.42	+0.6
3,938,653	-		AO353_17890	0.42	-2.0
3,938,817	+		AO353_17890	0.77	+0.6