Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_17700

Experiment: Sisomicin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sisomicin 0.008 mg/ml
3,897,766	+		AO353_17695	0.36	-1.9
3,897,767	-		AO353_17695	0.36	+0.5
3,897,767	-		AO353_17695	0.36	+1.7
3,897,767	-		AO353_17695	0.36	-1.3
3,897,799	+		AO353_17695	0.38	+1.5
3,897,799	+		AO353_17695	0.38	-0.2
3,897,799	+		AO353_17695	0.38	+1.5
3,897,800	-		AO353_17695	0.38	-1.6
3,897,800	-		AO353_17695	0.38	+0.1
3,897,800	-		AO353_17695	0.38	-0.1
3,897,865	+		AO353_17695	0.44	+0.5
3,897,865	+		AO353_17695	0.44	-0.1
3,897,865	+		AO353_17695	0.44	+1.9
3,897,866	-		AO353_17695	0.44	-0.8
3,897,866	-		AO353_17695	0.44	-1.4
3,897,875	-		AO353_17695	0.44	-1.3
3,897,885	+		AO353_17695	0.45	-0.1
3,897,885	+		AO353_17695	0.45	-2.4
3,897,885	+		AO353_17695	0.45	-1.2
3,897,885	+		AO353_17695	0.45	-0.8
3,897,885	+		AO353_17695	0.45	-0.5
3,897,885	+		AO353_17695	0.45	+1.7
3,897,885	+		AO353_17695	0.45	-1.3
3,897,886	-		AO353_17695	0.45	-0.1
3,897,886	-		AO353_17695	0.45	-0.5
3,897,886	-		AO353_17695	0.45	+1.2
3,897,886	-		AO353_17695	0.45	-1.5
3,897,886	-		AO353_17695	0.45	+2.9
3,897,910	+		AO353_17695	0.47	+0.4
3,897,910	+		AO353_17695	0.47	-0.5
3,897,911	-		AO353_17695	0.47	-1.6
3,897,934	+		AO353_17695	0.49	+1.1
3,897,934	+		AO353_17695	0.49	+0.5
3,897,934	+		AO353_17695	0.49	-1.5
3,897,934	+		AO353_17695	0.49	+1.2
3,897,934	+		AO353_17695	0.49	-0.2
3,898,294	+		AO353_17695	0.79	+0.2
3,898,295	-		AO353_17695	0.79	+0.5
3,898,295	-		AO353_17695	0.79	-0.2
3,898,375	+		AO353_17695	0.86	-1.5
3,898,387	+		AO353_17695	0.87	+1.1
3,898,387	+		AO353_17695	0.87	+0.7
3,898,387	+		AO353_17695	0.87	+1.3
3,898,387	+		AO353_17695	0.87	-0.3
3,898,387	+		AO353_17695	0.87	+0.1
3,898,387	+		AO353_17695	0.87	+0.2
3,898,387	+		AO353_17695	0.87	-1.1
3,898,387	+		AO353_17695	0.87	+5.1
3,898,387	+		AO353_17695	0.87	+0.5
3,898,387	+		AO353_17695	0.87	+0.7
3,898,387	+		AO353_17695	0.87	+0.8
3,898,387	+		AO353_17695	0.87	-0.1
3,898,388	-		AO353_17695	0.87	+1.4
3,898,388	-		AO353_17695	0.87	-0.1
3,898,388	-		AO353_17695	0.87	+0.3
3,898,388	-		AO353_17695	0.87	+0.1
3,898,388	-		AO353_17695	0.87	-1.2
3,898,388	-		AO353_17695	0.87	+1.5
3,898,388	-		AO353_17695	0.87	+0.1
3,898,388	-		AO353_17695	0.87	+0.4
3,898,462	+				+0.4
3,898,462	+				-0.8
3,898,462	+				-1.2
3,898,462	+				+0.7
3,898,462	+				+0.2
3,898,462	+				-2.6
3,898,462	+				-0.4
3,898,462	+				+0.3
3,898,462	+				-0.6
3,898,463	-				-0.3
3,898,463	-				-2.6
3,898,463	-				+0.5
3,898,463	-				-0.3
3,898,463	-				-0.6
3,898,463	-				+0.5
3,898,535	+				+1.0
3,898,536	-				+0.2
3,898,536	-				-0.0
3,898,542	+				+0.2
3,898,542	+				-0.2
3,898,556	-				+0.5
3,898,638	+				-0.5
3,898,638	+				-0.5
3,898,638	+				+0.3
3,898,639	-				+1.6
3,898,639	-				-0.9
3,898,639	-				+0.4
3,898,639	-				-0.3
3,898,639	-				-2.0
3,898,639	-				-0.4
3,898,739	+				-0.6
3,898,739	+				-1.1
3,898,739	+				+1.7
3,898,740	-				-0.1
3,898,833	+				-0.4
3,898,833	+				+0.1
3,898,833	+				-0.5
3,898,895	+		AO353_17700	0.11	+0.5
3,898,895	+		AO353_17700	0.11	+0.4
3,898,895	+		AO353_17700	0.11	-0.8
3,898,895	+		AO353_17700	0.11	+0.6
3,898,895	+		AO353_17700	0.11	+0.6
3,898,896	-		AO353_17700	0.11	-0.5
3,898,896	-		AO353_17700	0.11	+0.5
3,898,974	+		AO353_17700	0.16	+1.0
3,898,974	+		AO353_17700	0.16	-0.5
3,898,974	+		AO353_17700	0.16	+2.1
3,898,974	+				+0.9
3,898,974	+		AO353_17700	0.16	-0.5
3,898,974	+		AO353_17700	0.16	+0.8
3,898,974	+		AO353_17700	0.16	+0.9
3,898,975	-		AO353_17700	0.16	-0.3
3,898,975	-		AO353_17700	0.16	+1.2
3,898,975	-		AO353_17700	0.16	-1.1
3,898,975	-		AO353_17700	0.16	+0.9
3,898,975	-		AO353_17700	0.16	+0.5
3,898,975	-		AO353_17700	0.16	-1.6
3,899,033	+		AO353_17700	0.20	+0.9
3,899,034	-		AO353_17700	0.20	+0.5
3,899,295	+		AO353_17700	0.38	-0.4
3,899,296	-		AO353_17700	0.38	-0.8
3,899,296	-		AO353_17700	0.38	+0.6
3,899,296	-		AO353_17700	0.38	+0.4
3,899,296	-		AO353_17700	0.38	-1.7
3,899,296	-		AO353_17700	0.38	+1.2
3,899,418	+		AO353_17700	0.46	+0.8
3,899,466	+		AO353_17700	0.49	-0.5
3,899,466	+		AO353_17700	0.49	-0.8
3,899,466	+		AO353_17700	0.49	-0.8
3,899,466	+		AO353_17700	0.49	-0.7
3,899,466	+		AO353_17700	0.49	-1.0
3,899,466	+		AO353_17700	0.49	-1.6
3,899,466	+		AO353_17700	0.49	+0.2
3,899,466	+		AO353_17700	0.49	+1.8
3,899,466	+		AO353_17700	0.49	+0.9
3,899,466	+		AO353_17700	0.49	+1.5
3,899,466	+		AO353_17700	0.49	-0.4
3,899,466	+		AO353_17700	0.49	-0.5
3,899,466	+		AO353_17700	0.49	-0.6
3,899,466	+		AO353_17700	0.49	-0.6
3,899,466	+		AO353_17700	0.49	+0.7
3,899,466	+		AO353_17700	0.49	+0.1
3,899,467	-		AO353_17700	0.50	-1.5
3,899,467	-		AO353_17700	0.50	-0.3
3,899,467	-		AO353_17700	0.50	-0.6
3,899,467	-		AO353_17700	0.50	-0.5
3,899,467	-		AO353_17700	0.50	+0.6
3,899,467	-		AO353_17700	0.50	+1.3
3,899,467	-		AO353_17700	0.50	+1.2
3,899,467	-		AO353_17700	0.50	+0.1
3,899,467	-		AO353_17700	0.50	-1.2
3,899,468	+		AO353_17700	0.50	+1.9
3,899,536	-		AO353_17700	0.54	-1.2
3,899,536	-		AO353_17700	0.54	-0.5
3,899,536	-		AO353_17700	0.54	+0.5
3,899,646	+		AO353_17700	0.62	+1.7
3,899,646	+		AO353_17700	0.62	-2.2
3,899,646	+		AO353_17700	0.62	+0.4
3,899,646	+		AO353_17700	0.62	-1.7
3,899,647	-		AO353_17700	0.62	-2.2
3,899,664	+		AO353_17700	0.63	+0.4
3,899,664	+		AO353_17700	0.63	-2.2
3,899,664	+		AO353_17700	0.63	-0.5
3,899,665	-		AO353_17700	0.63	-0.3
3,899,665	-		AO353_17700	0.63	-0.3
3,899,665	-		AO353_17700	0.63	-0.1
3,899,721	+		AO353_17700	0.67	-1.1
3,899,721	+		AO353_17700	0.67	-0.1
3,899,721	+		AO353_17700	0.67	+1.9
3,899,722	-		AO353_17700	0.67	+2.2
3,899,722	-		AO353_17700	0.67	+0.3
3,899,868	+		AO353_17700	0.77	-1.2
3,899,868	+		AO353_17700	0.77	-0.9
3,899,869	-		AO353_17700	0.77	-2.0
3,899,869	-		AO353_17700	0.77	-0.8
3,899,869	-		AO353_17700	0.77	-0.6
3,899,869	-		AO353_17700	0.77	-0.8
3,899,869	-		AO353_17700	0.77	-0.8
3,899,869	-		AO353_17700	0.77	+0.0
3,899,869	-		AO353_17700	0.77	+0.5
3,899,895	+		AO353_17700	0.79	+1.9
3,899,976	+		AO353_17700	0.84	-0.3
3,900,174	-				-1.4
3,900,289	+				-0.3
3,900,306	+				-0.1
3,900,306	+				-0.1
3,900,306	+				-0.3
3,900,313	+				+0.5
3,900,313	+				-0.3
3,900,313	+				+0.7
3,900,313	+				+1.2
3,900,313	+				-2.1
3,900,313	+				-2.8
3,900,314	-				-0.4
3,900,314	-				-1.9
3,900,314	-				+0.4
3,900,314	-				-1.5
3,900,314	-				+0.2
3,900,314	-				-0.3
3,900,329	-				-0.3
3,900,342	-				-0.4
3,900,367	-				+1.2
3,900,367	-				-0.3
3,900,398	+				+0.5
3,900,398	+				-1.6
3,900,399	-				+0.3
3,900,466	+				-0.6
3,900,466	+				+0.4
3,900,467	-				+1.2
3,900,467	-				+1.5
3,900,480	+		AO353_17705	0.10	+1.0
3,900,481	-		AO353_17705	0.11	-0.3
3,900,602	-		AO353_17705	0.26	-1.1
3,900,701	-		AO353_17705	0.38	+0.3
3,900,738	-		AO353_17705	0.43	-2.2
3,900,740	+		AO353_17705	0.43	-0.5
3,900,740	+		AO353_17705	0.43	+1.4
3,900,740	+		AO353_17705	0.43	-0.9
3,900,740	+		AO353_17705	0.43	+0.9
3,900,740	+		AO353_17705	0.43	-1.3
3,900,741	-		AO353_17705	0.43	-0.7
3,900,741	-		AO353_17705	0.43	+0.9
3,900,755	+		AO353_17705	0.45	+0.1
3,901,045	-		AO353_17705	0.82	-0.9
3,901,050	+		AO353_17705	0.82	-0.6
3,901,050	+		AO353_17705	0.82	-0.6
3,901,050	+		AO353_17705	0.82	+0.6
3,901,050	+		AO353_17705	0.82	-0.6
3,901,051	-		AO353_17705	0.83	+1.3
3,901,051	-		AO353_17705	0.83	+0.4
3,901,152	+				+0.1
3,901,152	+				+0.4
3,901,152	+				-0.3
3,901,152	+				-1.4
3,901,152	+				+0.5
3,901,153	-				+1.2
3,901,153	-				+0.8
3,901,153	-				+0.4
3,901,153	-				-0.6
3,901,153	-				-0.1
3,901,153	-				+0.9
3,901,153	-				+0.2
3,901,153	-				-1.6