Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_17500

Experiment: Sisomicin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sisomicin 0.008 mg/ml
3,862,670	-		AO353_17490	0.88	+1.3
3,862,775	+				+0.1
3,862,776	-				-0.1
3,862,776	-				-1.6
3,862,791	+				+0.5
3,862,791	+				-2.1
3,862,792	-				+0.0
3,862,792	-				-0.6
3,862,792	-				-0.9
3,862,792	-				+0.2
3,862,868	-				-1.5
3,862,868	-				+0.8
3,862,880	-				+1.1
3,862,880	-				+2.0
3,862,880	-				-0.1
3,862,932	+				-0.5
3,862,980	+		AO353_17495	0.14	+0.7
3,862,980	+		AO353_17495	0.14	+0.8
3,862,980	+		AO353_17495	0.14	+0.7
3,862,980	+		AO353_17495	0.14	-2.1
3,862,981	-		AO353_17495	0.14	+0.1
3,862,981	-		AO353_17495	0.14	+0.2
3,862,981	-		AO353_17495	0.14	+0.4
3,862,981	-		AO353_17495	0.14	-1.4
3,862,981	-		AO353_17495	0.14	-1.4
3,862,981	-		AO353_17495	0.14	-0.2
3,863,037	-		AO353_17495	0.22	-0.3
3,863,126	+		AO353_17495	0.35	+0.4
3,863,126	+		AO353_17495	0.35	-1.6
3,863,126	+		AO353_17495	0.35	-0.6
3,863,127	-		AO353_17495	0.35	-0.4
3,863,127	-		AO353_17495	0.35	-2.3
3,863,127	-		AO353_17495	0.35	+0.5
3,863,127	-		AO353_17495	0.35	-1.4
3,863,127	-		AO353_17495	0.35	+1.0
3,863,135	+		AO353_17495	0.36	+1.9
3,863,135	+		AO353_17495	0.36	-1.3
3,863,135	+		AO353_17495	0.36	+0.5
3,863,135	+		AO353_17495	0.36	-1.3
3,863,135	+		AO353_17495	0.36	+3.9
3,863,135	+		AO353_17495	0.36	+2.7
3,863,136	-		AO353_17495	0.36	+1.5
3,863,146	-		AO353_17495	0.38	+1.1
3,863,160	-		AO353_17495	0.40	-0.4
3,863,249	+		AO353_17495	0.53	-0.3
3,863,249	+		AO353_17495	0.53	-0.5
3,863,249	+		AO353_17495	0.53	+0.5
3,863,249	+		AO353_17495	0.53	-0.2
3,863,249	+		AO353_17495	0.53	+1.5
3,863,250	-		AO353_17495	0.53	-0.4
3,863,250	-		AO353_17495	0.53	-0.4
3,863,250	-		AO353_17495	0.53	-1.6
3,863,250	-		AO353_17495	0.53	-1.1
3,863,250	-		AO353_17495	0.53	-0.9
3,863,312	-		AO353_17495	0.62	+0.1
3,863,312	-		AO353_17495	0.62	+0.5
3,863,326	-		AO353_17495	0.64	-2.3
3,863,326	-		AO353_17495	0.64	-0.4
3,863,347	+		AO353_17495	0.67	-3.2
3,863,347	+		AO353_17495	0.67	-0.6
3,863,347	+		AO353_17495	0.67	+0.3
3,863,347	+		AO353_17495	0.67	+0.2
3,863,347	+		AO353_17495	0.67	-0.1
3,863,347	+		AO353_17495	0.67	-0.3
3,863,347	+		AO353_17495	0.67	-1.8
3,863,348	-		AO353_17495	0.67	+1.2
3,863,348	-		AO353_17495	0.67	-0.4
3,863,348	-		AO353_17495	0.67	-0.6
3,863,348	-		AO353_17495	0.67	+1.8
3,863,348	-		AO353_17495	0.67	-1.9
3,863,348	-		AO353_17495	0.67	+0.8
3,863,459	+		AO353_17495	0.83	-0.9
3,863,459	+		AO353_17495	0.83	-1.3
3,863,459	+		AO353_17495	0.83	-0.1
3,863,460	-		AO353_17495	0.83	-0.6
3,863,460	-		AO353_17495	0.83	-2.6
3,863,460	-		AO353_17495	0.83	+0.2
3,863,460	-		AO353_17495	0.83	+1.2
3,863,460	-		AO353_17495	0.83	-0.2
3,863,460	-		AO353_17495	0.83	+1.6
3,863,460	-		AO353_17495	0.83	+0.5
3,863,476	+		AO353_17495	0.85	-0.6
3,863,476	+		AO353_17495	0.85	+0.3
3,863,476	+		AO353_17495	0.85	+0.9
3,863,476	+		AO353_17495	0.85	+1.5
3,863,476	+		AO353_17495	0.85	-0.4
3,863,476	+		AO353_17495	0.85	+0.8
3,863,476	+		AO353_17495	0.85	+0.2
3,863,477	-		AO353_17495	0.85	+1.5
3,863,477	-		AO353_17495	0.85	-0.9
3,863,477	-		AO353_17495	0.85	+0.9
3,863,477	-		AO353_17495	0.85	+2.5
3,863,477	-		AO353_17495	0.85	+3.1
3,863,477	-		AO353_17495	0.85	+0.8
3,863,477	-		AO353_17495	0.85	-1.3
3,863,477	-		AO353_17495	0.85	+1.9
3,863,477	-		AO353_17495	0.85	+0.4
3,863,477	-		AO353_17495	0.85	-0.6
3,863,485	+		AO353_17495	0.87	-0.5
3,863,485	+		AO353_17495	0.87	+0.7
3,863,485	+		AO353_17495	0.87	+0.9
3,863,485	+		AO353_17495	0.87	-0.3
3,863,485	+		AO353_17495	0.87	+0.3
3,863,485	+		AO353_17495	0.87	+0.5
3,863,486	-		AO353_17495	0.87	-2.0
3,863,486	-		AO353_17495	0.87	-0.5
3,863,486	-		AO353_17495	0.87	+0.5
3,863,486	-		AO353_17495	0.87	-0.6
3,863,486	-		AO353_17495	0.87	-0.4
3,863,486	-		AO353_17495	0.87	-1.1
3,863,486	-		AO353_17495	0.87	-0.1
3,863,489	+		AO353_17495	0.87	+1.5
3,863,489	+		AO353_17495	0.87	-1.0
3,863,490	-		AO353_17495	0.87	+0.2
3,863,490	-		AO353_17495	0.87	-0.5
3,863,490	-		AO353_17495	0.87	-1.2
3,863,490	-		AO353_17495	0.87	+1.4
3,863,510	+				+1.5
3,863,510	+				-1.3
3,863,542	+				-1.8
3,863,542	+				+0.1
3,863,542	+				+0.8
3,863,542	+				+0.7
3,863,542	+				+1.3
3,863,542	+				+0.9
3,863,542	+				-0.9
3,863,542	+				-1.2
3,863,542	+				-0.6
3,863,542	+				-0.5
3,863,542	+				+1.8
3,863,542	+				+0.5
3,863,542	+				-0.9
3,863,542	+				-0.3
3,863,543	-				-0.3
3,863,543	-				-0.1
3,863,543	-				+0.1
3,863,543	-				+0.2
3,863,543	-				-0.4
3,863,543	-				+0.4
3,863,543	-				-1.6
3,863,543	-				-0.6
3,863,543	-				-1.5
3,863,543	-				-0.5
3,863,543	-				-0.5
3,863,735	+		AO353_17500	0.21	-0.3
3,863,751	+		AO353_17500	0.23	-0.6
3,863,752	-		AO353_17500	0.24	-0.6
3,863,759	+		AO353_17500	0.25	-0.8
3,863,759	+		AO353_17500	0.25	-1.3
3,863,760	-		AO353_17500	0.25	-0.9
3,863,760	-		AO353_17500	0.25	+0.2
3,863,760	-		AO353_17500	0.25	+1.4
3,863,760	-		AO353_17500	0.25	+1.4
3,863,763	+		AO353_17500	0.25	-0.3
3,863,763	+		AO353_17500	0.25	-0.9
3,863,764	-		AO353_17500	0.25	-0.1
3,863,764	-		AO353_17500	0.25	+0.3
3,863,764	-		AO353_17500	0.25	-0.2
3,863,764	-		AO353_17500	0.25	-0.8
3,863,782	+		AO353_17500	0.28	+0.2
3,863,782	+		AO353_17500	0.28	-0.5
3,863,783	-		AO353_17500	0.28	-0.3
3,863,783	-		AO353_17500	0.28	+0.2
3,863,783	-		AO353_17500	0.28	+1.3
3,863,783	-		AO353_17500	0.28	+0.9
3,863,783	-		AO353_17500	0.28	+0.8
3,863,871	+				+0.9
3,863,871	+		AO353_17500	0.40	-1.5
3,863,871	+		AO353_17500	0.40	+0.7
3,863,871	+		AO353_17500	0.40	+0.9
3,863,872	-		AO353_17500	0.40	+0.3
3,863,908	-		AO353_17500	0.45	+2.1
3,863,908	-		AO353_17500	0.45	-0.4
3,863,926	-				+0.9
3,864,154	+		AO353_17500	0.80	+1.1
3,864,154	+		AO353_17500	0.80	+1.2
3,864,154	+		AO353_17500	0.80	-1.9
3,864,154	+		AO353_17500	0.80	+1.1
3,864,154	+		AO353_17500	0.80	-0.4
3,864,155	-		AO353_17500	0.80	+1.2
3,864,155	-		AO353_17500	0.80	-0.5
3,864,180	-		AO353_17500	0.83	+0.9
3,864,180	-		AO353_17500	0.83	-1.7
3,864,193	+		AO353_17500	0.85	-0.5
3,864,212	-		AO353_17500	0.88	-1.1
3,864,212	-		AO353_17500	0.88	+1.1
3,864,227	+				+2.5
3,864,228	-				+0.5
3,864,238	+				+1.4
3,864,270	+				+1.1
3,864,270	+				-0.1
3,864,286	+				-0.1
3,864,286	+				+0.3
3,864,286	+				-0.9
3,864,286	+				-0.3
3,864,287	-				-0.5
3,864,287	-				-1.6
3,864,290	+				-0.7
3,864,290	+				-1.4
3,864,290	+				+0.5
3,864,290	+				-2.0
3,864,290	+				-0.5
3,864,291	-				-0.7
3,864,291	-				+0.0
3,864,291	-				-1.1
3,864,291	-				+0.2
3,864,291	-				+0.2
3,864,291	-				-1.7
3,864,291	-				+0.2
3,864,291	-				-0.3
3,864,295	+				-1.6
3,864,295	+				-1.6
3,864,295	+				+1.2
3,864,296	-				-1.3
3,864,296	-				-1.5
3,864,296	-				-1.7
3,864,296	-				-0.8
3,864,296	-				+0.8
3,864,296	-				-0.3
3,864,370	+		AO353_17505	0.12	-1.3
3,864,371	-		AO353_17505	0.13	-0.9
3,864,371	-		AO353_17505	0.13	-0.9
3,864,371	-		AO353_17505	0.13	-1.3
3,864,371	-		AO353_17505	0.13	-2.1
3,864,371	-		AO353_17505	0.13	-0.1
3,864,375	+		AO353_17505	0.14	+2.2
3,864,375	+		AO353_17505	0.14	+1.1
3,864,375	+		AO353_17505	0.14	+1.3
3,864,376	-		AO353_17505	0.14	-0.3
3,864,393	-		AO353_17505	0.19	-0.3
3,864,393	-		AO353_17505	0.19	-0.5
3,864,393	-		AO353_17505	0.19	-1.5
3,864,415	+		AO353_17505	0.26	-0.1
3,864,415	+		AO353_17505	0.26	-0.5
3,864,416	-		AO353_17505	0.27	+0.9
3,864,428	-		AO353_17505	0.31	-0.2
3,864,446	-		AO353_17505	0.36	+1.3
3,864,544	+		AO353_17505	0.67	-1.3
3,864,544	+		AO353_17505	0.67	+0.1
3,864,544	+		AO353_17505	0.67	+1.2
3,864,544	+		AO353_17505	0.67	-1.7
3,864,545	-		AO353_17505	0.67	-0.6
3,864,545	-		AO353_17505	0.67	+0.4
3,864,545	-		AO353_17505	0.67	-1.4
3,864,552	-		AO353_17505	0.69	-0.3
3,864,573	-		AO353_17505	0.76	-0.8
3,864,610	+		AO353_17505	0.88	-1.7
3,864,610	+		AO353_17505	0.88	+0.9
3,864,610	+		AO353_17505	0.88	+0.7
3,864,610	+		AO353_17505	0.88	+0.5
3,864,610	+		AO353_17505	0.88	-1.2
3,864,610	+		AO353_17505	0.88	+1.3
3,864,611	-		AO353_17505	0.88	+0.0
3,864,611	-		AO353_17505	0.88	-1.9
3,864,611	-		AO353_17505	0.88	+2.5
3,864,611	-		AO353_17505	0.88	-0.1
3,864,611	-		AO353_17505	0.88	+1.8
3,864,611	-		AO353_17505	0.88	-0.4
3,864,695	-				+0.2
3,864,854	+		AO353_17510	0.29	-0.5
3,864,854	+		AO353_17510	0.29	+1.4
3,864,854	+		AO353_17510	0.29	+0.3
3,864,854	+		AO353_17510	0.29	-0.2
3,864,854	+		AO353_17510	0.29	+0.6
3,864,854	+		AO353_17510	0.29	+0.7
3,864,854	+		AO353_17510	0.29	+0.6
3,864,855	-		AO353_17510	0.29	+1.9
3,864,855	-		AO353_17510	0.29	-0.1
3,864,855	-		AO353_17510	0.29	+0.5
3,864,855	-		AO353_17510	0.29	-2.1
3,864,855	-		AO353_17510	0.29	+1.5
3,864,855	-		AO353_17510	0.29	+0.2
3,864,855	-		AO353_17510	0.29	+1.0
3,864,860	+		AO353_17510	0.30	+0.5
3,864,861	-				-0.5
3,864,871	-		AO353_17510	0.32	+0.9
3,864,871	-		AO353_17510	0.32	-0.6
3,864,871	-		AO353_17510	0.32	-2.0
3,864,971	+		AO353_17510	0.50	-0.1
3,864,971	+		AO353_17510	0.50	-0.9
3,864,971	+		AO353_17510	0.50	+0.9
3,864,972	-		AO353_17510	0.50	-0.2
3,864,972	-		AO353_17510	0.50	-0.6
3,864,972	-		AO353_17510	0.50	+0.5
3,864,972	-		AO353_17510	0.50	+0.8
3,864,972	-		AO353_17510	0.50	-0.2
3,864,972	-		AO353_17510	0.50	-1.8
3,865,016	-		AO353_17510	0.58	+0.5
3,865,047	+		AO353_17510	0.63	+0.1
3,865,047	+		AO353_17510	0.63	+1.4
3,865,047	+		AO353_17510	0.63	-1.2
3,865,047	+		AO353_17510	0.63	+1.9
3,865,047	+		AO353_17510	0.63	+1.8
3,865,047	+		AO353_17510	0.63	-0.3
3,865,048	-		AO353_17510	0.63	-1.0
3,865,048	-		AO353_17510	0.63	+0.6
3,865,049	+		AO353_17510	0.63	+0.7
3,865,085	+		AO353_17510	0.70	+1.1
3,865,085	+		AO353_17510	0.70	-0.8
3,865,106	+		AO353_17510	0.74	+0.9
3,865,107	-		AO353_17510	0.74	-1.2
3,865,107	-		AO353_17510	0.74	-0.9
3,865,172	+		AO353_17510	0.85	-0.1
3,865,237	+				-0.7
3,865,237	+				-0.6
3,865,237	+				+0.7
3,865,237	+				-0.8
3,865,237	+				+2.5
3,865,237	+				-1.2
3,865,237	+				-1.8
3,865,237	+				-1.1
3,865,237	+				+0.2
3,865,237	+				+0.7
3,865,238	-				-0.3
3,865,238	-				+0.3
3,865,238	-				+0.0
3,865,238	-				-1.6
3,865,238	-				-0.1
3,865,238	-				+0.8
3,865,238	-				+1.2
3,865,238	-				-0.2
3,865,238	-				-0.8
3,865,238	-				-0.3
3,865,238	-				+0.1
3,865,238	-				-1.3
3,865,240	+				+0.5
3,865,241	-				-0.2
3,865,241	-				-0.3
3,865,241	-				-2.5
3,865,253	+				-0.2
3,865,254	-				-0.6
3,865,254	-				+0.1