Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_16875

Experiment: Sisomicin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sisomicin 0.008 mg/ml
3,731,635	-		AO353_16865	0.76	-0.6
3,731,843	+				+0.6
3,731,843	+				-0.2
3,731,843	+				-0.2
3,731,843	+				+0.3
3,731,843	+				-0.4
3,731,843	+				-1.7
3,731,843	+				-0.5
3,731,843	+				+0.6
3,731,844	-				-0.0
3,731,844	-				-0.0
3,731,844	-				+1.4
3,731,844	-				+0.1
3,731,844	-				-1.0
3,731,844	-				-1.2
3,731,844	-				-2.1
3,731,844	-				-0.2
3,731,894	-				+1.3
3,732,076	+		AO353_16870	0.39	+0.6
3,732,076	+		AO353_16870	0.39	+1.4
3,732,076	+		AO353_16870	0.39	+1.3
3,732,076	+		AO353_16870	0.39	+2.0
3,732,076	+		AO353_16870	0.39	+2.6
3,732,076	+		AO353_16870	0.39	-0.4
3,732,076	+		AO353_16870	0.39	-0.9
3,732,077	-		AO353_16870	0.39	+1.3
3,732,077	-		AO353_16870	0.39	+0.5
3,732,077	-		AO353_16870	0.39	+0.5
3,732,246	+		AO353_16870	0.75	-0.2
3,732,247	-		AO353_16870	0.75	-1.0
3,732,247	-		AO353_16870	0.75	-0.6
3,732,256	+		AO353_16870	0.77	-0.4
3,732,256	+		AO353_16870	0.77	-1.6
3,732,256	+		AO353_16870	0.77	-0.9
3,732,256	+		AO353_16870	0.77	-1.9
3,732,257	-		AO353_16870	0.77	-0.2
3,732,257	-		AO353_16870	0.77	+0.2
3,732,257	-		AO353_16870	0.77	+0.4
3,732,257	-		AO353_16870	0.77	-0.4
3,732,322	+				-0.9
3,732,322	+				-0.7
3,732,323	-				-0.5
3,732,323	-				-1.7
3,732,417	+				-0.2
3,732,417	+				-0.3
3,732,417	+				-1.4
3,732,418	-				+2.3
3,732,418	-				-0.2
3,732,418	-				+1.7
3,732,418	-				-0.2
3,732,418	-				+0.7
3,732,422	+				-0.0
3,732,423	-				+2.9
3,732,423	-				+0.3
3,732,428	+				+0.8
3,732,428	+				-0.8
3,732,429	-				-0.5
3,732,429	-				+0.2
3,732,429	-				-0.4
3,732,469	+				+0.4
3,732,482	+				-0.5
3,732,483	-				-1.5
3,732,483	-				-1.0
3,732,483	-				+1.0
3,732,506	+				+1.5
3,732,506	+				-0.2
3,732,506	+				-0.9
3,732,507	-				+0.3
3,732,507	-				+1.0
3,732,577	+				+0.6
3,732,577	+				+1.2
3,732,577	+				+1.6
3,732,577	+				+1.0
3,732,577	+				-0.0
3,732,577	+				+2.1
3,732,577	+				+0.9
3,732,577	+				+0.6
3,732,578	-				-1.0
3,732,578	-				-1.4
3,732,803	+		AO353_16875	0.24	+0.3
3,732,804	-		AO353_16875	0.24	+1.1
3,732,857	+		AO353_16875	0.28	+1.4
3,732,857	+		AO353_16875	0.28	+0.7
3,732,858	-		AO353_16875	0.28	-1.4
3,732,858	-		AO353_16875	0.28	-0.0
3,733,095	-		AO353_16875	0.46	+0.3
3,733,100	+		AO353_16875	0.46	+1.3
3,733,100	+		AO353_16875	0.46	+1.2
3,733,100	+		AO353_16875	0.46	+1.5
3,733,101	-		AO353_16875	0.46	+0.3
3,733,101	-		AO353_16875	0.46	+1.0
3,733,101	-		AO353_16875	0.46	-1.3
3,733,101	-		AO353_16875	0.46	-0.9
3,733,101	-		AO353_16875	0.46	+0.2
3,733,196	+		AO353_16875	0.54	+1.6
3,733,196	+		AO353_16875	0.54	+2.1
3,733,197	-		AO353_16875	0.54	+0.8
3,733,382	+		AO353_16875	0.67	+0.2
3,733,382	+		AO353_16875	0.67	+1.8
3,733,382	+		AO353_16875	0.67	+1.5
3,733,383	-		AO353_16875	0.68	-0.4
3,733,388	+		AO353_16875	0.68	+2.4
3,733,389	-		AO353_16875	0.68	+1.1
3,733,389	-		AO353_16875	0.68	-2.2
3,733,496	+		AO353_16875	0.76	+2.3
3,733,496	+		AO353_16875	0.76	+1.9
3,733,534	+		AO353_16875	0.79	+2.2
3,733,534	+		AO353_16875	0.79	+1.8
3,733,534	+		AO353_16875	0.79	+2.3
3,733,534	+		AO353_16875	0.79	+3.3
3,733,535	-		AO353_16875	0.79	+0.6
3,733,535	-		AO353_16875	0.79	-0.2
3,733,535	-		AO353_16875	0.79	+1.2
3,733,688	+				+1.1
3,733,688	+				+3.3
3,733,688	+				+3.8
3,733,688	+				+3.3
3,733,688	+				+2.4
3,733,689	-				+1.1
3,733,689	-				+1.0
3,733,706	+				+3.6
3,733,706	+				+2.3
3,733,706	+				+3.6
3,733,706	+				+2.8
3,733,707	-				-1.3
3,733,707	-				-1.7
3,733,774	+				+3.2
3,733,775	-				+1.6
3,733,775	-				-0.7
3,733,775	-				+0.6
3,733,788	+				+3.3
3,733,788	+				+2.7
3,733,789	-				-0.4
3,733,819	+				+3.0
3,733,819	+				+0.3
3,733,819	+				+3.4
3,733,820	-				+0.3
3,733,820	-				+0.8
3,733,820	-				+0.3
3,733,910	-				-0.0
3,733,938	+				+3.6
3,733,950	+				+2.1
3,733,950	+				+3.5
3,733,951	-				-0.9
3,733,951	-				+1.6
3,733,995	-				+0.8
3,734,010	-				-0.6
3,734,020	+				+2.6
3,734,020	+				+2.8
3,734,021	-				+1.0
3,734,021	-				-1.7
3,734,021	-				-1.9
3,734,026	+				+2.4
3,734,026	+				+1.8
3,734,026	+				+1.3
3,734,027	-				+0.7
3,734,027	-				-0.4
3,734,030	+				+1.4
3,734,030	+				+2.2
3,734,030	+				+0.2
3,734,031	-				-0.2
3,734,031	-				-0.2
3,734,031	-				-1.1
3,734,031	-				+1.0
3,734,102	+				-0.4
3,734,102	+				-0.3
3,734,103	-				-1.2
3,734,152	+				-1.7
3,734,152	+				-1.2
3,734,152	+				-1.5
3,734,152	+				-0.0
3,734,152	+				-2.1
3,734,152	+				-1.3
3,734,153	-				-0.2
3,734,153	-				-1.1
3,734,153	-				-0.6
3,734,164	-				-0.9
3,734,228	+				-1.2
3,734,255	+				+0.3
3,734,255	+				+1.1
3,734,255	+				-1.5
3,734,255	+				-1.5
3,734,255	+				+0.7
3,734,255	+				-1.1
3,734,256	-				+0.0
3,734,256	-				-0.4
3,734,256	-				-2.1
3,734,257	+				-0.4
3,734,258	-				-2.0
3,734,313	+				-0.7
3,734,313	+				-0.4
3,734,314	-				-0.2
3,734,369	+		AO353_16880	0.12	-1.6
3,734,369	+		AO353_16880	0.12	-2.3
3,734,369	+		AO353_16880	0.12	-0.0
3,734,369	+		AO353_16880	0.12	-1.0
3,734,369	+		AO353_16880	0.12	+0.4
3,734,369	+		AO353_16880	0.12	-0.9
3,734,369	+		AO353_16880	0.12	+0.4
3,734,369	+		AO353_16880	0.12	-1.4
3,734,370	-		AO353_16880	0.12	-0.9
3,734,370	-		AO353_16880	0.12	+1.0
3,734,370	-		AO353_16880	0.12	-1.0
3,734,370	-		AO353_16880	0.12	-1.6
3,734,370	-		AO353_16880	0.12	-1.9
3,734,370	-		AO353_16880	0.12	+0.3
3,734,370	-		AO353_16880	0.12	+1.0
3,734,370	-		AO353_16880	0.12	+0.1
3,734,370	-		AO353_16880	0.12	-0.6
3,734,370	-		AO353_16880	0.12	+0.3
3,734,513	+		AO353_16880	0.20	+2.0
3,734,718	+		AO353_16880	0.30	-0.1
3,734,718	+		AO353_16880	0.30	-1.4
3,734,719	-		AO353_16880	0.30	-0.4
3,734,719	-		AO353_16880	0.30	-0.9
3,734,735	-		AO353_16880	0.31	-1.4
3,734,735	-		AO353_16880	0.31	-0.4
3,734,735	-		AO353_16880	0.31	-0.4
3,734,784	+		AO353_16880	0.34	+0.3
3,734,784	+		AO353_16880	0.34	-2.4
3,734,784	+		AO353_16880	0.34	-0.2
3,734,784	+		AO353_16880	0.34	-1.2
3,734,785	-		AO353_16880	0.34	-1.4
3,734,785	-		AO353_16880	0.34	+0.6
3,734,785	-		AO353_16880	0.34	-1.7
3,734,785	-		AO353_16880	0.34	-0.2
3,734,785	-		AO353_16880	0.34	-0.9
3,734,811	+		AO353_16880	0.35	-0.2
3,734,811	+		AO353_16880	0.35	+0.4
3,734,811	+		AO353_16880	0.35	-0.5
3,734,811	+		AO353_16880	0.35	-0.8
3,734,811	+		AO353_16880	0.35	+0.0
3,734,811	+		AO353_16880	0.35	-1.7
3,734,811	+		AO353_16880	0.35	-0.2
3,734,812	-		AO353_16880	0.35	-0.4
3,734,812	-		AO353_16880	0.35	+1.0