Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_16735

Experiment: Sisomicin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sisomicin 0.008 mg/ml
3,708,705	+				-1.1
3,708,705	+				-0.6
3,708,705	+				-1.0
3,708,705	+				+0.6
3,708,705	+				-0.2
3,708,705	+				+1.2
3,708,705	+				-1.0
3,708,705	+				-1.6
3,708,706	-				+0.9
3,708,706	-				-1.0
3,708,706	-				-0.7
3,708,706	-				-0.1
3,708,706	-				+0.3
3,708,706	-				+0.3
3,708,850	+				-0.2
3,708,851	-				+2.9
3,708,870	+				+1.6
3,708,871	-				-0.8
3,708,963	+		AO353_16725	0.12	+0.6
3,708,963	+		AO353_16725	0.12	-0.7
3,708,963	+		AO353_16725	0.12	-0.7
3,708,963	+		AO353_16725	0.12	+7.8
3,708,964	-		AO353_16725	0.13	+0.4
3,708,964	-		AO353_16725	0.13	-0.8
3,708,964	-		AO353_16725	0.13	-2.0
3,708,964	-		AO353_16725	0.13	+0.4
3,708,964	-		AO353_16725	0.13	+0.6
3,709,013	+		AO353_16725	0.21	-1.0
3,709,013	+		AO353_16725	0.21	+0.3
3,709,014	-		AO353_16725	0.21	+1.2
3,709,014	-		AO353_16725	0.21	-0.6
3,709,014	-		AO353_16725	0.21	+0.2
3,709,014	-		AO353_16725	0.21	-1.1
3,709,123	+		AO353_16725	0.40	+0.0
3,709,124	-		AO353_16725	0.40	-0.7
3,709,124	-		AO353_16725	0.40	+0.6
3,709,124	-		AO353_16725	0.40	-0.6
3,709,124	-		AO353_16725	0.40	+1.8
3,709,217	+		AO353_16725	0.56	+0.7
3,709,218	-		AO353_16725	0.56	-0.3
3,709,262	+		AO353_16725	0.64	-0.6
3,709,464	+				+0.3
3,709,464	+				+0.7
3,709,465	-				-0.0
3,709,465	-				+0.3
3,709,465	-				-0.4
3,709,465	-				+1.6
3,709,465	-				+1.0
3,709,465	-				-1.1
3,709,465	-				+1.0
3,709,465	-				-1.4
3,709,611	+		AO353_16730	0.77	-1.8
3,709,651	+				+1.0
3,709,704	+				+0.1
3,709,705	-				+1.3
3,709,705	-				-1.4
3,709,705	-				-0.8
3,709,878	+		AO353_16735	0.15	+0.3
3,709,878	+		AO353_16735	0.15	+2.8
3,709,878	+		AO353_16735	0.15	-1.0
3,709,879	-		AO353_16735	0.15	-1.1
3,709,879	-		AO353_16735	0.15	+0.3
3,709,879	-		AO353_16735	0.15	-1.0
3,710,010	+		AO353_16735	0.24	+0.0
3,710,010	+		AO353_16735	0.24	-0.6
3,710,010	+		AO353_16735	0.24	+0.0
3,710,010	+		AO353_16735	0.24	+0.5
3,710,011	-		AO353_16735	0.24	-0.4
3,710,011	-		AO353_16735	0.24	-0.2
3,710,011	-		AO353_16735	0.24	+1.0
3,710,011	-		AO353_16735	0.24	-0.6
3,710,011	-		AO353_16735	0.24	+0.2
3,710,294	-		AO353_16735	0.43	+0.0
3,710,369	+		AO353_16735	0.48	+1.6
3,710,370	-		AO353_16735	0.48	-0.7
3,710,370	-		AO353_16735	0.48	+0.6
3,710,370	-		AO353_16735	0.48	+0.9
3,710,370	-		AO353_16735	0.48	-1.0
3,710,370	-		AO353_16735	0.48	-1.0
3,710,439	+		AO353_16735	0.53	+1.6
3,710,439	+		AO353_16735	0.53	+0.2
3,710,439	+		AO353_16735	0.53	-0.8
3,710,439	+		AO353_16735	0.53	+0.5
3,710,440	-		AO353_16735	0.53	-1.3
3,710,440	-		AO353_16735	0.53	-1.3
3,710,440	-		AO353_16735	0.53	+0.1
3,710,440	-		AO353_16735	0.53	+0.5
3,710,440	-		AO353_16735	0.53	+1.0
3,710,440	-		AO353_16735	0.53	+2.5
3,710,697	+		AO353_16735	0.70	+0.4
3,710,697	+		AO353_16735	0.70	+0.3
3,710,697	+		AO353_16735	0.70	+0.2
3,710,697	+		AO353_16735	0.70	+0.3
3,710,698	-		AO353_16735	0.70	-1.1
3,710,698	-		AO353_16735	0.70	-0.2
3,710,698	-		AO353_16735	0.70	-0.2
3,710,715	+		AO353_16735	0.71	-0.8
3,710,715	+		AO353_16735	0.71	+0.2
3,710,718	+		AO353_16735	0.71	-0.2
3,710,718	+		AO353_16735	0.71	-0.4
3,710,718	+		AO353_16735	0.71	-0.2
3,710,719	-		AO353_16735	0.71	-1.1
3,710,719	-		AO353_16735	0.71	-1.6
3,710,719	-		AO353_16735	0.71	+0.3
3,710,719	-		AO353_16735	0.71	+0.0
3,710,719	-		AO353_16735	0.71	+0.2
3,710,719	-		AO353_16735	0.71	+0.6
3,710,719	-		AO353_16735	0.71	+2.0
3,710,719	-		AO353_16735	0.71	+1.0
3,710,761	-		AO353_16735	0.74	+1.6
3,710,775	+		AO353_16735	0.75	+0.0
3,710,796	+		AO353_16735	0.76	+0.7
3,710,796	+		AO353_16735	0.76	-1.3
3,710,797	-		AO353_16735	0.76	-0.4
3,710,797	-		AO353_16735	0.76	+0.3
3,710,797	-		AO353_16735	0.76	+0.0
3,710,797	-		AO353_16735	0.76	+0.3
3,710,797	-		AO353_16735	0.76	-0.4
3,710,868	+		AO353_16735	0.81	-0.0
3,710,868	+		AO353_16735	0.81	+0.0
3,710,868	+		AO353_16735	0.81	-0.6
3,710,869	-		AO353_16735	0.81	-0.2
3,710,869	-		AO353_16735	0.81	-3.1
3,710,964	+		AO353_16735	0.88	-0.6
3,711,081	+				+0.6
3,711,081	+				-1.0
3,711,081	+				-0.4
3,711,081	+				+0.8
3,711,081	+				-0.2
3,711,082	-				-0.5
3,711,082	-				+0.8
3,711,132	+				+0.4
3,711,133	-				-1.1
3,711,197	+				-1.6
3,711,198	-				+0.6
3,711,198	-				+0.7
3,711,198	-				+0.5
3,711,243	+				+0.2
3,711,243	+				-1.0
3,711,243	+				+0.5
3,711,243	+				-0.7
3,711,243	+				-2.4
3,711,243	+				+0.9
3,711,244	-				-0.3
3,711,244	-				+1.3
3,711,336	+		AO353_16740	0.34	+1.3
3,711,337	-		AO353_16740	0.35	-1.0
3,711,337	-		AO353_16740	0.35	-0.1
3,711,480	+		AO353_16740	0.76	-1.0
3,711,480	+		AO353_16740	0.76	-1.4
3,711,480	+		AO353_16740	0.76	+0.2
3,711,480	+		AO353_16740	0.76	-0.6
3,711,480	+		AO353_16740	0.76	+3.2
3,711,481	-		AO353_16740	0.76	+0.8
3,711,481	-		AO353_16740	0.76	+0.6
3,711,674	+		AO353_16745	0.38	+1.4
3,711,728	+		AO353_16745	0.57	+0.3
3,711,728	+		AO353_16745	0.57	+1.6
3,711,729	-		AO353_16745	0.57	+0.6
3,711,729	-		AO353_16745	0.57	+0.0
3,711,729	-		AO353_16745	0.57	-1.9
3,711,868	+				-1.7
3,711,869	-				-1.2