Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_13090

Experiment: Sisomicin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sisomicin 0.008 mg/ml
2,900,611	-		AO353_13085	0.59	-0.3
2,900,795	+		AO353_13085	0.71	-0.3
2,900,796	-		AO353_13085	0.71	-1.5
2,900,796	-		AO353_13085	0.71	-0.6
2,901,163	-				+0.7
2,901,206	+				+1.3
2,901,262	+				-1.2
2,901,263	-				+0.3
2,901,263	-				+1.4
2,901,288	-				-0.5
2,901,309	-				-1.0
2,901,310	+				-0.8
2,901,310	+				-0.6
2,901,310	+				-1.7
2,901,311	-				-1.1
2,901,336	+				-1.4
2,901,336	+				-0.3
2,901,336	+				-2.3
2,901,336	+				-0.4
2,901,336	+				-1.9
2,901,336	+				-1.1
2,901,336	+				-2.6
2,901,337	-				+1.0
2,901,337	-				+2.1
2,901,364	+				-0.6
2,901,364	+				-0.5
2,901,364	+				-0.2
2,901,365	-				-0.6
2,901,383	+				+0.5
2,901,383	+				+0.8
2,901,383	+				-1.1
2,901,383	+				+0.5
2,901,383	+				-0.4
2,901,383	+				-0.2
2,901,383	+				+2.5
2,901,383	+				+2.6
2,901,383	+				-0.6
2,901,383	+				+0.0
2,901,384	-				+0.5
2,901,384	-				-0.9
2,901,384	-				+1.2
2,901,384	-				+1.4
2,901,384	-				+2.8
2,901,384	-				-1.3
2,901,387	+				-2.9
2,901,387	+				-2.4
2,901,387	+				+0.3
2,901,387	+				+0.4
2,901,387	+				+0.5
2,901,387	+				+0.3
2,901,387	+				-0.9
2,901,387	+				+0.5
2,901,387	+				-0.3
2,901,387	+				-0.6
2,901,387	+				-0.5
2,901,387	+				-0.2
2,901,387	+				-0.2
2,901,387	+				-1.5
2,901,387	+				-0.3
2,901,387	+				-1.9
2,901,387	+				-1.2
2,901,387	+				+0.3
2,901,387	+				+0.7
2,901,387	+				+0.6
2,901,387	+				+0.8
2,901,387	+				-1.1
2,901,388	-				-0.5
2,901,388	-				-0.9
2,901,388	-				-0.1
2,901,388	-				+0.8
2,901,388	-				+0.9
2,901,388	-				-1.1
2,901,388	-				+3.4
2,901,388	-				+0.3
2,901,388	-				+0.5
2,901,388	-				-0.3
2,901,388	-				-0.1
2,901,388	-				+2.4
2,901,388	-				+1.9
2,901,388	-				-1.7
2,901,388	-				-1.7
2,901,388	-				-0.7
2,901,388	-				-1.3
2,901,388	-				+0.7
2,901,388	-				+0.5
2,901,391	+				-0.6
2,901,391	+				-0.3
2,901,391	+				+0.0
2,901,391	+				-2.5
2,901,391	+				-1.6
2,901,391	+				-0.5
2,901,391	+				-2.3
2,901,391	+				+0.8
2,901,391	+				+0.4
2,901,391	+				-0.6
2,901,392	-				+1.7
2,901,392	-				+0.4
2,901,392	-				-0.6
2,901,392	-				+1.0
2,901,398	+				-0.7
2,901,398	+				+1.9
2,901,398	+				-0.5
2,901,398	+				+0.3
2,901,398	+				-1.7
2,901,398	+				-1.5
2,901,398	+				+0.3
2,901,398	+				-2.3
2,901,399	-				+0.5
2,901,399	-				+0.4
2,901,399	-				+2.1
2,901,399	-				-0.3
2,901,399	-				-1.0
2,901,399	-				-1.1
2,901,399	-				+0.7
2,901,399	-				-2.1
2,901,399	-				-0.2
2,901,402	+				-0.5
2,901,402	+				-0.5
2,901,402	+				+0.3
2,901,402	+				-1.6
2,901,402	+				-0.5
2,901,403	-				+0.1
2,901,403	-				+0.8
2,901,403	-				-0.4
2,901,403	-				-1.6
2,901,403	-				-1.1
2,901,403	-				-0.2
2,901,403	-				-1.5
2,901,403	-				+1.0
2,901,403	-				+0.3
2,901,403	-				+0.3
2,901,403	-				+0.4
2,901,403	-				+0.7
2,901,414	+				+0.5
2,901,431	+				-1.0
2,901,432	-				-0.0
2,901,432	-				+1.6
2,901,454	+				+0.3
2,901,454	+				-0.4
2,901,454	+				-1.1
2,901,622	+		AO353_13090	0.26	-0.9
2,901,622	+		AO353_13090	0.26	+1.4
2,901,622	+		AO353_13090	0.26	-0.4
2,901,622	+		AO353_13090	0.26	+2.0
2,901,622	+		AO353_13090	0.26	-1.7
2,901,622	+		AO353_13090	0.26	-0.5
2,901,623	-		AO353_13090	0.26	-1.7
2,901,623	-		AO353_13090	0.26	+2.8
2,901,646	+		AO353_13090	0.29	+1.3
2,901,646	+		AO353_13090	0.29	-1.3
2,901,647	-		AO353_13090	0.29	-0.2
2,901,647	-		AO353_13090	0.29	+0.9
2,901,647	-		AO353_13090	0.29	+0.6
2,901,653	+		AO353_13090	0.29	-1.6
2,901,653	+		AO353_13090	0.29	-1.1
2,901,654	-		AO353_13090	0.29	-0.3
2,901,654	-		AO353_13090	0.29	+0.7
2,901,654	-		AO353_13090	0.29	-1.5
2,901,654	-		AO353_13090	0.29	+0.2
2,901,737	-		AO353_13090	0.39	-1.2
2,901,737	-		AO353_13090	0.39	-1.6
2,901,784	+		AO353_13090	0.45	-0.7
2,901,784	+		AO353_13090	0.45	-0.1
2,901,785	-		AO353_13090	0.45	+1.9
2,901,785	-		AO353_13090	0.45	-0.9
2,902,007	+		AO353_13090	0.71	-1.2
2,902,007	+		AO353_13090	0.71	+1.8
2,902,007	+		AO353_13090	0.71	-1.3
2,902,007	+		AO353_13090	0.71	-0.6
2,902,007	+		AO353_13090	0.71	-0.5
2,902,007	+		AO353_13090	0.71	-0.6
2,902,007	+		AO353_13090	0.71	-2.2
2,902,007	+		AO353_13090	0.71	-1.7
2,902,007	+		AO353_13090	0.71	+3.3
2,902,007	+		AO353_13090	0.71	+2.8
2,902,007	+		AO353_13090	0.71	-1.0
2,902,007	+		AO353_13090	0.71	-0.1
2,902,007	+		AO353_13090	0.71	-0.5
2,902,008	-		AO353_13090	0.71	-0.0
2,902,008	-		AO353_13090	0.71	+0.0
2,902,008	-		AO353_13090	0.71	+1.0
2,902,008	-		AO353_13090	0.71	-1.3
2,902,008	-		AO353_13090	0.71	-0.5
2,902,008	-		AO353_13090	0.71	-0.1
2,902,008	-		AO353_13090	0.71	+1.0
2,902,008	-		AO353_13090	0.71	+0.7
2,902,008	-		AO353_13090	0.71	-0.3
2,902,008	-		AO353_13090	0.71	-1.0
2,902,008	-		AO353_13090	0.71	+0.3
2,902,008	-		AO353_13090	0.71	+1.4
2,902,008	-		AO353_13090	0.71	+0.7
2,902,051	+		AO353_13090	0.76	-1.1
2,902,052	-		AO353_13090	0.76	-0.2
2,902,110	+		AO353_13090	0.83	-0.5
2,902,110	+		AO353_13090	0.83	-0.1
2,902,110	+		AO353_13090	0.83	-0.9
2,902,110	+		AO353_13090	0.83	-1.9
2,902,111	-		AO353_13090	0.83	-1.6
2,902,111	-		AO353_13090	0.83	+0.5
2,902,111	-		AO353_13090	0.83	+2.8
2,902,111	-		AO353_13090	0.83	+0.0
2,902,114	+		AO353_13090	0.83	-2.7
2,902,114	+		AO353_13090	0.83	-2.2
2,902,114	+		AO353_13090	0.83	-1.7
2,902,114	+		AO353_13090	0.83	+0.4
2,902,114	+		AO353_13090	0.83	-2.0
2,902,114	+		AO353_13090	0.83	-0.2
2,902,114	+		AO353_13090	0.83	+0.5
2,902,114	+		AO353_13090	0.83	+0.2
2,902,115	-		AO353_13090	0.84	-0.3
2,902,115	-		AO353_13090	0.84	-0.2
2,902,115	-		AO353_13090	0.84	-0.1
2,902,115	-		AO353_13090	0.84	-1.9
2,902,271	+				+0.1
2,902,271	+				-1.2
2,902,271	+				-0.5
2,902,271	+				-0.2
2,902,271	+				-0.3
2,902,271	+				-2.3
2,902,272	-				-0.1
2,902,272	-				-0.4
2,902,272	-				-0.2
2,902,272	-				-1.3
2,902,272	-				+0.3
2,902,272	-				-0.5
2,902,272	-				+0.8
2,902,272	-				+0.0
2,902,328	+				-1.0
2,902,329	-				+0.9
2,902,337	-				-1.3
2,902,393	+				-1.4
2,902,393	+				+1.8
2,902,393	+				-0.3
2,902,393	+				-1.2
2,902,393	+				-1.5
2,902,393	+				-2.6
2,902,393	+				-0.7
2,902,393	+				-1.4
2,902,394	-				+0.3
2,902,394	-				+0.8
2,902,394	-				+1.2
2,902,394	-				+0.3
2,902,394	-				+0.3
2,902,394	-				+1.3
2,902,394	-				+0.9
2,902,394	-				-1.1
2,902,394	-				-0.6
2,902,413	+				+0.4
2,902,413	+				-0.9
2,902,413	+				+1.5
2,902,413	+				+1.0
2,902,413	+				-1.7
2,902,413	+				+1.4
2,902,413	+				-2.1
2,902,413	+				-1.7
2,902,413	+				-0.7
2,902,413	+				+0.2
2,902,413	+				+0.2
2,902,414	-				-0.2
2,902,414	-				-0.9
2,902,414	-				-0.3
2,902,414	-				-0.6
2,902,414	-				+2.0
2,902,414	-				+3.4
2,902,414	-				+1.4
2,902,414	-				-1.1
2,902,425	+				-3.1
2,902,425	+				+0.9
2,902,426	-				-2.9
2,902,426	-				+0.8
2,902,945	+		AO353_13095	0.50	-0.7
2,902,946	-		AO353_13095	0.51	-1.1
2,902,946	-		AO353_13095	0.51	-0.0
2,902,956	+		AO353_13095	0.51	-0.0
2,902,956	+		AO353_13095	0.51	-1.1
2,902,956	+		AO353_13095	0.51	+0.0
2,902,956	+		AO353_13095	0.51	-0.7
2,902,956	+		AO353_13095	0.51	-1.4
2,902,956	+		AO353_13095	0.51	+0.6
2,902,957	-		AO353_13095	0.52	-0.7
2,902,957	-		AO353_13095	0.52	-0.2
2,903,119	+		AO353_13095	0.67	+2.1